Model info
| Transcription factor | Ahr | ||||||||
| Model | AHR_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dKhGCGTGh | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 157 | ||||||||
| TF family | PAS domain factors {1.2.5} | ||||||||
| TF subfamily | Ahr-like factors {1.2.5.1} | ||||||||
| MGI | MGI:105043 | ||||||||
| EntrezGene | GeneID:11622 (SSTAR profile) | ||||||||
| UniProt ID | AHR_MOUSE | ||||||||
| UniProt AC | P30561 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Ahr expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 40.513 | 18.259 | 56.413 | 38.774 |
| 02 | 10.877 | 11.871 | 34.663 | 96.547 |
| 03 | 21.717 | 43.883 | 20.707 | 67.652 |
| 04 | 2.547 | 1.317 | 145.864 | 4.231 |
| 05 | 0.0 | 150.358 | 1.493 | 2.107 |
| 06 | 3.441 | 0.79 | 149.376 | 0.351 |
| 07 | 0.0 | 3.441 | 0.702 | 149.815 |
| 08 | 0.0 | 0.0 | 153.959 | 0.0 |
| 09 | 43.079 | 66.876 | 16.16 | 27.844 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.05 | -0.711 | 0.372 | 0.007 |
| 02 | -1.186 | -1.108 | -0.101 | 0.9 |
| 03 | -0.548 | 0.127 | -0.593 | 0.55 |
| 04 | -2.346 | -2.736 | 1.309 | -1.98 |
| 05 | -3.452 | 1.339 | -2.67 | -2.469 |
| 06 | -2.135 | -2.965 | 1.332 | -3.206 |
| 07 | -3.452 | -2.135 | -3.009 | 1.335 |
| 08 | -3.452 | -3.452 | 1.362 | -3.452 |
| 09 | 0.109 | 0.539 | -0.825 | -0.312 |