Model info
Transcription factorALX4
ModelALX4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensushTAATTARATTA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words23663
TF familyPaired-related HD factors{3.1.3}
TF subfamilyALX{3.1.3.1}
HGNC450
EntrezGene60529
UniProt IDALX4_HUMAN
UniProt ACQ9H161
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.48139
0.0005 1.49572
0.0001 5.29009
GTEx tissue expression atlas ALX4 expression
ReMap ChIP-seq dataset list ALX4 datasets
Motifs in JASPAR
PCM
ACGT
013870.9567295.0843216.2468840.919
02112.45637.82723.61523049.307
0323128.3573.97419.44271.432
0423221.6350.3140.9420.314
050.07.9321.25623214.017
067.7341024.68415.89822174.89
0718232.9170.04990.2880.0
0813734.561417.8659046.75124.028
0922119.166212.188685.513206.338
1061.32684.29757.98823019.594
11357.555231.86289.80822543.98
1222765.935114.877126.148216.245
PWM
ACGT
01-0.4050.228-0.590.42
02-3.922-4.97-5.4041.378
031.382-6.797-5.578-4.364
041.386-7.628-7.427-7.628
05-7.745-6.321-7.341.386
06-6.34-1.732-5.7541.34
071.144-7.745-0.151-7.745
080.861-2.6260.443-5.388
091.337-3.298-2.133-3.325
10-4.511-4.203-4.5641.377
11-2.781-3.21-4.1421.356
121.366-3.902-3.81-3.279