Model info
Transcription factorTFAP2A
ModelAP2A_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length15
Quality
A
Motif rank
0
ConsensusdddSCCTGRGGShdd
Best auROC (human)0.9555608662042089
Best auROC (mouse)0.9365864911042728
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)13
Aligned words500
TF familyAP-2{1.3.1}
TF subfamilyAP-2alpha{1.3.1.0.1}
HGNC11742
EntrezGene7020
UniProt IDAP2A_HUMAN
UniProt ACP05549
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.19641
0.0005 5.40371
0.0001 7.71001
PCM
ACGT
01208.07892.68296.563102.676
02115.55945.5667.335271.546
0388.3847.199235.113129.307
045.417260.302215.72518.556
050.0500.00.00.0
060.0450.4870.049.513
0725.46955.6536.392412.486
080.9190.0398.283100.797
09267.66719.294204.6188.421
1071.0790.0428.0430.878
110.00.0500.00.0
1223.932278.059189.9998.009
13154.127190.81845.87109.185
14256.52146.71102.12994.64
15119.2674.447104.199202.095
PWM
ACGT
010.505-0.295-0.255-0.194
02-0.078-0.988-0.6080.769
03-0.342-0.9540.6260.033
04-2.8990.7270.541-1.839
05-4.41.377-4.4-4.4
06-4.41.273-4.4-0.908
07-1.544-0.794-2.7681.185
08-3.935-4.41.15-0.212
090.755-1.8030.488-2.541
10-0.555-4.41.222-3.952
11-4.4-4.41.377-4.4
12-1.6030.7930.414-2.583
130.2070.419-0.982-0.133
140.713-0.964-0.199-0.274
15-0.046-0.51-0.180.476