Model info
Transcription factorTfap2a
ModelAP2A_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnvbdSCCYGRGGCnvn
Best auROC (human)0.9539535680917913
Best auROC (mouse)0.9640313592928975
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)13
Aligned words501
TF familyAP-2{1.3.1}
TF subfamilyAP-2alpha{1.3.1.0.1}
MGI104671
EntrezGene21418
UniProt IDAP2A_MOUSE
UniProt ACP34056
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.84321
0.0005 7.39361
0.0001 12.91961
GTEx tissue expression atlas Tfap2a expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0161.013.032.011.079.040.029.030.042.022.023.011.015.028.043.021.0
0242.040.050.065.016.017.09.061.021.029.026.051.07.011.09.046.0
0317.08.050.011.025.019.026.027.022.025.032.015.054.023.0115.031.0
043.027.086.02.00.026.048.01.01.0166.052.04.00.09.075.00.0
050.03.01.00.00.0228.00.00.00.0261.00.00.00.07.00.00.0
060.00.00.00.00.0485.00.014.01.00.00.00.00.00.00.00.0
070.00.00.01.010.0117.032.0326.00.00.00.00.02.01.04.07.0
080.00.012.00.09.00.0109.00.01.00.035.00.028.00.0305.01.0
0918.01.019.00.00.00.00.00.0253.048.0160.00.00.00.01.00.0
1012.00.0259.00.03.00.046.00.018.00.0162.00.00.00.00.00.0
110.00.033.00.00.00.00.00.00.00.0466.01.00.00.00.00.0
120.00.00.00.00.00.00.00.04.0359.0133.03.00.01.00.00.0
131.02.00.01.080.065.094.0121.015.084.019.015.00.01.01.01.0
1430.014.042.010.080.015.018.039.024.031.040.019.043.024.060.011.0
1536.045.051.045.015.025.06.038.025.040.048.047.05.020.023.031.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.663-0.860.023-1.0220.920.244-0.074-0.040.293-0.346-0.302-1.022-0.721-0.1080.316-0.392
020.2930.2440.4650.726-0.658-0.599-1.2150.663-0.392-0.074-0.1810.485-1.454-1.022-1.2150.383
03-0.599-1.3280.465-1.022-0.22-0.49-0.181-0.144-0.346-0.220.023-0.7210.542-0.3021.294-0.008
04-2.234-0.1441.004-2.584-4.4-0.1810.425-3.126-3.1261.660.504-1.975-4.4-1.2150.868-4.4
05-4.4-2.234-3.126-4.4-4.41.977-4.4-4.4-4.42.112-4.4-4.4-4.4-1.454-4.4-4.4
06-4.4-4.4-4.4-4.4-4.42.731-4.4-0.788-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4
07-4.4-4.4-4.4-3.126-1.1141.3110.0232.334-4.4-4.4-4.4-4.4-2.584-3.126-1.975-1.454
08-4.4-4.4-0.938-4.4-1.215-4.41.241-4.4-3.126-4.40.112-4.4-0.108-4.42.267-3.126
09-0.543-3.126-0.49-4.4-4.4-4.4-4.4-4.42.0810.4251.623-4.4-4.4-4.4-3.126-4.4
10-0.938-4.42.104-4.4-2.234-4.40.383-4.4-0.543-4.41.636-4.4-4.4-4.4-4.4-4.4
11-4.4-4.40.054-4.4-4.4-4.4-4.4-4.4-4.4-4.42.691-3.126-4.4-4.4-4.4-4.4
12-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-1.9752.431.439-2.234-4.4-3.126-4.4-4.4
13-3.126-2.584-4.4-3.1260.9320.7261.0931.345-0.7210.981-0.49-0.721-4.4-3.126-3.126-3.126
14-0.04-0.7880.293-1.1140.932-0.721-0.5430.219-0.26-0.0080.244-0.490.316-0.260.646-1.022
150.140.3610.4850.361-0.721-0.22-1.60.193-0.220.2440.4250.404-1.77-0.439-0.302-0.008