Model info
Transcription factorTfap2b
ModelAP2B_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
B
Motif rank
0
ConsensusGSCYGRGGRv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words30
TF familyAP-2{1.3.1}
TF subfamilyAP-2beta{1.3.1.0.2}
MGI104672
EntrezGene21419
UniProt IDAP2B_MOUSE
UniProt ACQ61313
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.22296
0.0005 4.91401
0.0001 6.30432
GTEx tissue expression atlas Tfap2b expression
Motifs in JASPAR
PCM
ACGT
011.1030.021.8434.964
020.018.0936.842.979
030.026.9180.00.993
043.19915.9960.08.715
052.0960.99324.8220.0
069.1578.8269.9290.0
071.9860.99323.8291.103
080.00.027.9110.0
095.3233.44818.8920.248
106.20612.4947.0882.124
PWM
ACGT
01-1.395-2.2391.066-0.298
02-2.2390.885-0.018-0.718
03-2.2391.268-2.239-1.454
04-0.6610.768-2.2390.201
05-0.981-1.4541.189-2.239
060.2460.2120.321-2.239
07-1.019-1.4541.15-1.395
08-2.239-2.2391.303-2.239
09-0.238-0.6020.926-1.978
10-0.1040.5340.014-0.972