Model info
Transcription factorTFAP2C
ModelAP2C_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnndSCCYGRGGShnndn
Best auROC (human)0.9636391899817504
Best auROC (mouse)0.9586032260898907
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)6
Aligned words497
TF familyAP-2{1.3.1}
TF subfamilyAP-2gamma{1.3.1.0.3}
HGNC11744
EntrezGene7022
UniProt IDAP2C_HUMAN
UniProt ACQ92754
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.04681
0.0005 9.44341
0.0001 14.33411
GTEx tissue expression atlas TFAP2C expression
ReMap ChIP-seq dataset list TFAP2C datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.029.036.067.033.023.07.065.021.020.028.060.08.014.015.038.0
0212.06.055.021.031.012.04.039.012.018.036.020.048.028.0123.031.0
032.031.066.04.02.027.033.02.08.0152.052.06.02.028.078.03.0
040.014.00.00.01.0237.00.00.00.0229.00.00.00.015.00.00.0
050.01.00.00.01.0466.00.028.00.00.00.00.00.00.00.00.0
061.00.00.00.019.075.015.0358.00.00.00.00.00.01.09.018.0
070.01.019.00.00.00.069.07.00.00.022.02.05.00.0340.031.0
080.01.04.00.00.00.00.01.0238.025.0187.00.025.01.014.00.0
0914.02.0246.01.03.00.024.00.037.00.0167.01.00.00.01.00.0
100.00.054.00.00.00.02.00.00.02.0435.01.01.00.01.00.0
110.00.01.00.01.01.00.00.017.0302.0159.014.00.00.01.00.0
123.04.04.07.086.069.043.0105.022.096.012.031.03.01.04.06.0
1353.018.029.014.095.023.013.039.019.017.014.013.059.017.064.09.0
1438.044.068.076.018.024.02.031.025.021.035.039.07.018.027.023.0
1524.07.037.020.033.014.020.040.036.014.045.037.015.019.072.063.0
1618.019.049.022.014.020.04.016.021.051.072.030.017.042.048.053.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.031-0.0660.1480.7640.062-0.294-1.4470.734-0.384-0.431-0.10.654-1.32-0.78-0.7130.201
02-0.93-1.5920.568-0.3840.0-0.93-1.9680.227-0.93-0.5350.148-0.4310.433-0.11.3690.0
03-2.5760.00.749-1.968-2.576-0.1360.062-2.576-1.321.580.512-1.592-2.576-0.10.915-2.226
04-4.393-0.78-4.393-4.393-3.1192.023-4.393-4.393-4.3931.989-4.393-4.393-4.393-0.713-4.393-4.393
05-4.393-3.119-4.393-4.393-3.1192.699-4.393-0.1-4.393-4.393-4.393-4.393-4.393-4.393-4.393-4.393
06-3.119-4.393-4.393-4.393-0.4820.876-0.7132.435-4.393-4.393-4.393-4.393-4.393-3.119-1.207-0.535
07-4.393-3.119-0.482-4.393-4.393-4.3930.793-1.447-4.393-4.393-0.338-2.576-1.762-4.3932.3840.0
08-4.393-3.119-1.968-4.393-4.393-4.393-4.393-3.1192.027-0.2121.787-4.393-0.212-3.119-0.78-4.393
09-0.78-2.5762.06-3.119-2.226-4.393-0.252-4.3930.175-4.3931.674-3.119-4.393-4.393-3.119-4.393
10-4.393-4.3930.55-4.393-4.393-4.393-2.576-4.393-4.393-2.5762.63-3.119-3.119-4.393-3.119-4.393
11-4.393-4.393-3.119-4.393-3.119-3.119-4.393-4.393-0.5912.2651.625-0.78-4.393-4.393-3.119-4.393
12-2.226-1.968-1.968-1.4471.0120.7930.3241.211-0.3381.122-0.930.0-2.226-3.119-1.968-1.592
130.531-0.535-0.066-0.781.112-0.294-0.8520.227-0.482-0.591-0.78-0.8520.638-0.5910.719-1.207
140.2010.3470.7790.889-0.535-0.252-2.5760.0-0.212-0.3840.120.227-1.447-0.535-0.136-0.294
15-0.252-1.4470.175-0.4310.062-0.78-0.4310.2520.148-0.780.3690.175-0.713-0.4820.8360.703
16-0.535-0.4820.453-0.338-0.78-0.431-1.968-0.65-0.3840.4930.836-0.032-0.5910.30.4330.531