Model info
Transcription factorTFAP2C
ModelAP2C_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length14
Quality
A
Motif rank
0
ConsensusvddSCCTGRGGShv
Best auROC (human)0.9499485425553528
Best auROC (mouse)0.9411843891267421
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)6
Aligned words501
TF familyAP-2{1.3.1}
TF subfamilyAP-2gamma{1.3.1.0.3}
HGNC11744
EntrezGene7022
UniProt IDAP2C_HUMAN
UniProt ACQ92754
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.54641
0.0005 4.75071
0.0001 7.15921
PCM
ACGT
01193.614100.515134.78371.088
0298.03761.79983.2256.963
0392.29849.886259.21598.601
044.767253.52235.9465.767
051.902494.1423.9570.0
060.934475.9111.17221.982
0725.00865.93312.689396.371
0817.6820.0458.60423.714
09277.51912.699207.9191.863
1036.720.0462.2940.985
110.00.0499.0580.942
1214.466309.124170.5095.902
13156.963175.7748.576118.691
14214.13885.26120.83479.768
PWM
ACGT
010.433-0.2150.074-0.555
02-0.24-0.692-0.4010.714
03-0.299-0.90.723-0.234
04-2.9970.7010.63-2.85
05-3.6011.365-3.134-4.4
06-3.9291.328-3.838-1.682
07-1.561-0.629-2.1841.146
08-1.884-4.41.291-1.611
090.791-2.1840.504-3.612
10-1.196-4.41.299-3.909
11-4.4-4.41.375-3.926
12-2.0670.8980.307-2.832
130.2250.337-0.926-0.051
140.533-0.377-0.033-0.442