Model info
Transcription factorTfap2c
ModelAP2C_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnhnbnSCCYCAGGShnn
Best auROC (human)0.9536945475952427
Best auROC (mouse)0.9616588852343042
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)6
Aligned words493
TF familyAP-2{1.3.1}
TF subfamilyAP-2gamma{1.3.1.0.3}
MGI106032
EntrezGene21420
UniProt IDAP2C_MOUSE
UniProt ACQ61312
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.92841
0.0005 8.36431
0.0001 13.65641
GTEx tissue expression atlas Tfap2c expression
ReMap ChIP-seq dataset list Tfap2c datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0131.035.018.018.034.082.012.054.033.059.014.017.08.043.011.023.0
0241.024.035.06.074.074.022.049.013.07.019.016.013.037.035.027.0
0319.037.036.049.024.050.09.059.015.039.026.031.07.032.019.040.0
043.015.032.015.062.030.030.036.013.033.029.015.038.025.082.034.0
055.020.087.04.07.026.070.00.05.093.072.03.04.025.067.04.0
060.021.00.00.00.0164.00.00.00.0293.01.02.00.011.00.00.0
070.00.00.00.00.0408.00.081.00.01.00.00.00.01.00.01.0
080.00.00.00.02.0175.039.0194.00.00.00.00.00.051.013.018.0
091.01.00.00.014.0210.00.02.00.052.00.00.015.0197.00.00.0
1029.00.01.00.0334.015.0108.03.00.00.00.00.02.00.00.00.0
118.00.0355.02.01.00.014.00.03.00.0106.00.00.00.03.00.0
121.00.011.00.00.00.00.00.00.01.0477.00.00.00.02.00.0
130.01.00.00.00.01.00.00.011.0227.0247.05.00.00.00.00.0
141.08.01.01.077.044.048.060.045.0150.026.026.01.03.01.00.0
1539.020.049.016.097.043.011.054.026.025.016.09.031.019.023.014.0
1631.046.064.052.012.036.017.042.010.041.030.018.010.022.037.024.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0080.128-0.527-0.5270.0990.973-0.9220.5580.070.646-0.772-0.583-1.3120.332-1.006-0.286
020.285-0.2440.128-1.5840.8710.871-0.330.461-0.844-1.439-0.474-0.642-0.8440.1830.128-0.128
03-0.4740.1830.1560.461-0.2440.481-1.1990.646-0.7050.235-0.1660.008-1.4390.039-0.4740.26
04-2.218-0.7050.039-0.7050.695-0.024-0.0240.156-0.8440.07-0.058-0.7050.209-0.2040.9730.099
05-1.754-0.4231.032-1.96-1.439-0.1660.816-4.387-1.7541.0980.844-2.218-1.96-0.2040.772-1.96
06-4.387-0.376-4.387-4.387-4.3871.664-4.387-4.387-4.3872.243-3.111-2.568-4.387-1.006-4.387-4.387
07-4.387-4.387-4.387-4.387-4.3872.574-4.3870.961-4.387-3.111-4.387-4.387-4.387-3.111-4.387-3.111
08-4.387-4.387-4.387-4.387-2.5681.7290.2351.831-4.387-4.387-4.387-4.387-4.3870.501-0.844-0.527
09-3.111-3.111-4.387-4.387-0.7721.911-4.387-2.568-4.3870.52-4.387-4.387-0.7051.847-4.387-4.387
10-0.058-4.387-3.111-4.3872.374-0.7051.247-2.218-4.387-4.387-4.387-4.387-2.568-4.387-4.387-4.387
11-1.312-4.3872.435-2.568-3.111-4.387-0.772-4.387-2.218-4.3871.229-4.387-4.387-4.387-2.218-4.387
12-3.111-4.387-1.006-4.387-4.387-4.387-4.387-4.387-4.387-3.1112.73-4.387-4.387-4.387-2.568-4.387
13-4.387-3.111-4.387-4.387-4.387-3.111-4.387-4.387-1.0061.9882.073-1.754-4.387-4.387-4.387-4.387
14-3.111-1.312-3.111-3.1110.910.3550.4410.6620.3771.575-0.166-0.166-3.111-2.218-3.111-4.387
150.235-0.4230.461-0.6421.140.332-1.0060.558-0.166-0.204-0.642-1.1990.008-0.474-0.286-0.772
160.0080.3990.7270.52-0.9220.156-0.5830.308-1.0980.285-0.024-0.527-1.098-0.330.183-0.244