Model info
Transcription factorTfap2d
ModelAP2D_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusnGbCCGRGGCnCGY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familyAP-2{1.3.1}
TF subfamilyAP-2delta{1.3.1.0.4}
MGI2153466
EntrezGene226896
UniProt IDAP2D_MOUSE
UniProt ACQ91ZK0
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.14881
0.0005 3.87272
0.0001 5.34088
GTEx tissue expression atlas Tfap2d expression
ReMap ChIP-seq dataset list Tfap2d datasets
Motifs in JASPAR
PCM
ACGT
011.1632.4421.1630.233
020.00.05.00.0
030.03.140.930.93
040.05.00.00.0
050.03.0230.01.977
060.00.05.00.0
071.9771.1631.860.0
080.00.05.00.0
090.00.05.00.0
100.04.070.930.0
110.931.1631.9770.93
120.04.070.930.0
130.00.934.070.0
140.2331.1630.2333.372
PWM
ACGT
01-0.0540.543-0.054-0.956
02-1.413-1.4131.185-1.413
03-1.4130.762-0.215-0.215
04-1.4131.185-1.413-1.413
05-1.4130.729-1.4130.365
06-1.413-1.4131.185-1.413
070.365-0.0540.314-1.413
08-1.413-1.4131.185-1.413
09-1.413-1.4131.185-1.413
10-1.4130.996-0.215-1.413
11-0.215-0.0540.365-0.215
12-1.4130.996-0.215-1.413
13-1.413-0.2150.996-1.413
14-0.956-0.054-0.9560.826