Model info
Transcription factorTfap2d
ModelAP2D_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusnGbCCGRGGCnCGY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familyAP-2{1.3.1}
TF subfamilyAP-2delta{1.3.1.0.4}
MGI2153466
EntrezGene226896
UniProt IDAP2D_MOUSE
UniProt ACQ91ZK0
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.14881
0.0005 3.87272
0.0001 5.34088
GTEx tissue expression atlas Tfap2d expression
Motifs in JASPAR
PCM
ACGT
011.1632.4421.1630.233
020.00.05.00.0
030.03.140.930.93
040.05.00.00.0
050.03.0230.01.977
060.00.05.00.0
071.9771.1631.860.0
080.00.05.00.0
090.00.05.00.0
100.04.070.930.0
110.931.1631.9770.93
120.04.070.930.0
130.00.934.070.0
140.2331.1630.2333.372
PWM
ACGT
01-0.0540.543-0.054-0.956
02-1.413-1.4131.185-1.413
03-1.4130.762-0.215-0.215
04-1.4131.185-1.413-1.413
05-1.4130.729-1.4130.365
06-1.413-1.4131.185-1.413
070.365-0.0540.314-1.413
08-1.413-1.4131.185-1.413
09-1.413-1.4131.185-1.413
10-1.4130.996-0.215-1.413
11-0.215-0.0540.365-0.215
12-1.4130.996-0.215-1.413
13-1.413-0.2150.996-1.413
14-0.956-0.054-0.9560.826