Model info
Transcription factorARID3A
ModelARI3A_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length22
Quality
D
Motif rank
0
ConsensusdWTTAAWYvRdWWYAAAWYWWW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words44
TF familyARID-related factors{3.7.1}
TF subfamilyARID3{3.7.1.3}
HGNC3031
EntrezGene1820
UniProt IDARI3A_HUMAN
UniProt ACQ99856
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.74031
0.0005 6.75591
0.0001 8.85951
GTEx tissue expression atlas ARID3A expression
ReMap ChIP-seq dataset list ARID3A datasets
Motifs in JASPAR
PCM
ACGT
0117.2474.25214.3858.266
0230.1034.0140.010.034
034.9680.00.039.183
046.9740.00.037.176
0542.1442.0070.00.0
0641.192.9610.00.0
0721.0220.01.05322.075
080.018.06210.03416.055
0912.9958.02719.1144.014
1022.0752.00716.0554.014
1120.0682.0076.97415.101
1232.2080.04.0147.928
136.0212.0074.01432.109
147.07325.1352.0079.935
1532.1090.00.012.041
1633.1622.0070.08.981
1742.1440.00.02.007
1818.0620.02.00724.082
195.0676.0214.01429.05
2023.0296.0211.05314.048
2127.0433.060.014.048
2229.3870.2383.29811.227
PWM
ACGT
010.417-0.8350.246-0.263
020.952-0.882-2.538-0.087
03-0.706-2.538-2.5381.209
04-0.414-2.538-2.5381.157
051.28-1.401-2.538-2.538
061.257-1.121-2.538-2.538
070.606-2.538-1.7910.653
08-2.5380.461-0.0870.35
090.151-0.2890.515-0.882
100.653-1.4010.35-0.882
110.562-1.401-0.4140.292
121.018-2.538-0.882-0.3
13-0.542-1.401-0.8821.015
14-0.4020.778-1.401-0.097
151.015-2.538-2.5380.08
161.046-1.401-2.538-0.188
171.28-2.538-2.538-1.401
180.461-2.538-1.4010.736
19-0.69-0.542-0.8820.917
200.693-0.542-1.7910.224
210.848-1.096-2.5380.224
220.929-2.314-1.0380.016