Model info
Transcription factorARNT2
ModelARNT2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusRnSGTGGvRSRS
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words18
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
HGNC16876
EntrezGene9915
UniProt IDARNT2_HUMAN
UniProt ACQ9HBZ2
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.13481
0.0005 4.76041
0.0001 6.01363
GTEx tissue expression atlas ARNT2 expression
ReMap ChIP-seq dataset list ARNT2 datasets
Motifs in JASPAR
PCM
ACGT
013.4791.49110.5462.485
022.9825.085.9633.975
030.011.9263.9752.098
040.00.99417.0060.0
050.00.00.99417.006
060.00.99417.0060.0
070.9940.015.9021.104
082.9825.9637.0671.988
0910.0490.04.9692.982
100.05.96310.0491.988
117.0670.08.9451.988
122.48510.5463.4791.491
PWM
ACGT
01-0.218-0.8580.769-0.488
02-0.3440.1050.247-0.106
03-1.9780.885-0.106-0.616
04-1.978-1.1131.222-1.978
05-1.978-1.978-1.1131.222
06-1.978-1.1131.222-1.978
07-1.113-1.9781.158-1.05
08-0.3440.2470.4-0.656
090.724-1.9780.086-0.344
10-1.9780.2470.724-0.656
110.4-1.9780.616-0.656
12-0.4880.769-0.218-0.858