Model info
Transcription factorArnt2
ModelARNT2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusRnSGTGGvRSRS
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words18
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
MGI107188
EntrezGene11864
UniProt IDARNT2_MOUSE
UniProt ACQ61324
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.19021
0.0005 4.80835
0.0001 6.04593
GTEx tissue expression atlas Arnt2 expression
Motifs in JASPAR
PCM
ACGT
013.4791.49110.5462.485
022.9825.085.9633.975
030.011.9263.9752.098
040.00.99417.0060.0
050.00.00.99417.006
060.00.99417.0060.0
070.9940.015.9021.104
082.9825.9637.0671.988
0910.0490.04.9692.982
100.05.96310.0491.988
117.0670.08.9451.988
122.48510.5463.4791.491
PWM
ACGT
01-0.218-0.8580.769-0.488
02-0.3440.1050.247-0.106
03-1.9780.885-0.106-0.616
04-1.978-1.1131.222-1.978
05-1.978-1.978-1.1131.222
06-1.978-1.1131.222-1.978
07-1.113-1.9781.158-1.05
08-0.3440.2470.4-0.656
090.724-1.9780.086-0.344
10-1.9780.2470.724-0.656
110.4-1.9780.616-0.656
12-0.4880.769-0.218-0.858