Model info
Transcription factorARNT
ModelARNT_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
B
Motif rank
0
ConsensusvdRCGTGMh
Best auROC (human)0.9357768582276432
Best auROC (mouse)
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)
Aligned words500
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
HGNC700
EntrezGene405
UniProt IDARNT_HUMAN
UniProt ACP27540
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.08252
0.0005 3.78077
0.0001 5.68841
PCM
ACGT
0176.0142.0215.067.0
0269.037.0121.0273.0
03351.015.0123.011.0
045.0474.01.020.0
053.01.0495.01.0
060.00.01.0499.0
070.03.0496.01.0
08178.0263.012.047.0
0977.0251.072.0100.0
PWM
ACGT
01-0.490.1260.537-0.613
02-0.584-1.189-0.0320.774
031.025-2.034-0.016-2.311
04-2.9611.324-3.903-1.77
05-3.325-3.9031.367-3.903
06-4.4-4.4-3.9031.375
07-4.4-3.3251.369-3.903
080.350.737-2.234-0.958
09-0.4770.691-0.543-0.22