Model info
Transcription factorAscl1
ModelASCL1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusbhvCASCTGYYbbh
Best auROC (human)0.9765176861535042
Best auROC (mouse)0.9898007789012891
Peak sets in benchmark (human)30
Peak sets in benchmark (mouse)25
Aligned words447
TF familyMyoD / ASC-related factors{1.2.2}
TF subfamilyAchaete-Scute-like factors{1.2.2.2}
MGI96919
EntrezGene17172
UniProt IDASCL1_MOUSE
UniProt ACQ02067
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.09761
0.0005 4.43211
0.0001 7.27311
GTEx tissue expression atlas Ascl1 expression
ReMap ChIP-seq dataset list Ascl1 datasets
Motifs in JASPAR
PCM
ACGT
0136.0260.075.076.0
02116.085.039.0207.0
0345.0128.0241.033.0
040.0447.00.00.0
05447.00.00.00.0
060.0195.0247.05.0
070.0443.00.04.0
080.00.01.0446.0
090.01.0446.00.0
1010.0355.037.045.0
1150.0209.00.0188.0
1227.0157.0144.0119.0
1347.0226.062.0112.0
1472.0171.063.0141.0
PWM
ACGT
01-1.1050.837-0.392-0.379
020.037-0.269-1.0280.61
03-0.890.1340.761-1.188
04-4.3071.376-4.307-4.307
051.376-4.307-4.307-4.307
06-4.3070.5510.786-2.854
07-4.3071.367-4.307-3.02
08-4.307-4.307-3.8031.374
09-4.307-3.8031.374-4.307
10-2.2851.147-1.079-0.89
11-0.7880.62-4.3070.515
12-1.3790.3360.2510.062
13-0.8480.697-0.5780.002
14-0.4320.421-0.5630.23