Model info
Transcription factorASCL2
ModelASCL2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
D
Motif rank
0
ConsensusvCASCTGCY
Best auROC (human)0.5938772670309863
Best auROC (mouse)0.9195612617618293
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)9
Aligned words505
TF familyMyoD / ASC-related factors{1.2.2}
TF subfamilyAchaete-Scute-like factors{1.2.2.2}
HGNC739
EntrezGene430
UniProt IDASCL2_HUMAN
UniProt ACQ99929
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.15271
0.0005 5.14301
0.0001 7.74808
GTEx tissue expression atlas ASCL2 expression
ReMap ChIP-seq dataset list ASCL2 datasets
Motifs in JASPAR
PCM
ACGT
01131.0176.0169.023.0
021.0494.02.02.0
03492.03.01.03.0
043.0176.0293.027.0
057.0489.01.02.0
062.02.00.0495.0
071.05.0481.012.0
083.0433.07.056.0
0951.0147.04.0297.0
PWM
ACGT
010.0480.3410.3-1.638
02-3.9011.367-3.571-3.571
031.363-3.323-3.901-3.323
04-3.3230.3410.847-1.487
05-2.6921.357-3.901-3.571
06-3.571-3.571-4.3981.369
07-3.901-2.9591.34-2.232
08-3.3231.236-2.692-0.786
09-0.8770.162-3.1240.86