Model info
Transcription factorAscl2
ModelASCL2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
C
Motif rank
0
ConsensusvCASCTGCY
Best auROC (human)0.5938772670309863
Best auROC (mouse)0.9195612617618293
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)9
Aligned words505
TF familyMyoD / ASC-related factors{1.2.2}
TF subfamilyAchaete-Scute-like factors{1.2.2.2}
MGI96920
EntrezGene17173
UniProt IDASCL2_MOUSE
UniProt ACO35885
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.24543
0.0005 5.25056
0.0001 7.758509999999999
GTEx tissue expression atlas Ascl2 expression
Motifs in JASPAR
PCM
ACGT
01131.0176.0169.023.0
021.0494.02.02.0
03492.03.01.03.0
043.0176.0293.027.0
057.0489.01.02.0
062.02.00.0495.0
071.05.0481.012.0
083.0433.07.056.0
0951.0147.04.0297.0
PWM
ACGT
010.0480.3410.3-1.638
02-3.9011.367-3.571-3.571
031.363-3.323-3.901-3.323
04-3.3230.3410.847-1.487
05-2.6921.357-3.901-3.571
06-3.571-3.571-4.3981.369
07-3.901-2.9591.34-2.232
08-3.3231.236-2.692-0.786
09-0.8770.162-3.1240.86