Model info
Transcription factorATF2
ModelATF2_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
0
ConsensusdvTGAbGWMAb
Best auROC (human)0.7508853198428019
Best auROC (mouse)0.8493368940353917
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words502
TF familyJun-related factors{1.1.1}
TF subfamilyATF-2-like factors{1.1.1.3}
HGNC784
EntrezGene1386
UniProt IDATF2_HUMAN
UniProt ACP15336
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.52212
0.0005 5.40369
0.0001 7.15837
GTEx tissue expression atlas ATF2 expression
ReMap ChIP-seq dataset list ATF2 datasets
Motifs in JASPAR
PCM
ACGT
01158.044.0232.066.0
02212.083.0192.013.0
0310.012.06.0472.0
048.07.0470.015.0
05452.06.07.035.0
0617.0181.0124.0178.0
071.021.0467.011.0
0863.036.013.0388.0
0979.0388.018.015.0
10438.09.032.021.0
1131.0127.092.0250.0
PWM
ACGT
010.232-1.0220.613-0.628
020.523-0.4030.425-2.163
03-2.394-2.234-2.8191.32
04-2.584-2.6941.315-2.034
051.276-2.819-2.694-1.242
06-1.920.366-0.0080.35
07-3.903-1.7251.309-2.311
08-0.673-1.215-2.1631.124
09-0.4521.124-1.868-2.034
101.245-2.484-1.328-1.725
11-1.3580.016-0.3020.687