Model info
Transcription factorATF2
ModelATF2_HUMAN.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
B
Motif rank
1
ConsensusddddRATGATGTCAThdhdd
Best auROC (human)0.7050599770741861
Best auROC (mouse)0.8064193358099894
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words1294
TF familyJun-related factors{1.1.1}
TF subfamilyATF-2-like factors{1.1.1.3}
HGNC784
EntrezGene1386
UniProt IDATF2_HUMAN
UniProt ACP15336
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.46199
0.0005 0.34841
0.0001 4.19691
GTEx tissue expression atlas ATF2 expression
ReMap ChIP-seq dataset list ATF2 datasets
Motifs in JASPAR
PCM
ACGT
01507.0154.0175.0457.0
02481.0135.0277.0400.0
03535.0131.0273.0354.0
04331.0158.0242.0562.0
05363.093.0732.0105.0
061179.01.0110.03.0
070.00.00.01293.0
080.00.01292.01.0
091293.00.00.00.0
100.0176.044.01073.0
111.00.01292.00.0
120.00.00.01293.0
1340.01251.00.02.0
141293.00.00.00.0
150.065.010.01218.0
16168.0669.0129.0327.0
17555.0198.0201.0339.0
18336.0211.0182.0564.0
19284.0181.0185.0643.0
20403.0177.0205.0508.0
PWM
ACGT
010.448-0.735-0.6090.345
020.396-0.865-0.1530.212
030.502-0.895-0.1680.09
040.024-0.71-0.2880.551
050.115-1.2320.814-1.113
061.29-4.757-1.067-4.217
07-5.201-5.201-5.2011.382
08-5.201-5.2011.381-4.757
091.382-5.201-5.201-5.201
10-5.201-0.603-1.961.196
11-4.757-5.2011.381-5.201
12-5.201-5.201-5.2011.382
13-2.0511.349-5.201-4.451
141.382-5.201-5.201-5.201
15-5.201-1.582-3.3171.322
16-0.6490.725-0.910.011
170.538-0.487-0.4720.047
180.038-0.424-0.570.554
19-0.129-0.576-0.5540.685
200.219-0.598-0.4520.45