Model info
Transcription factorATF2
ModelATF2_HUMAN.H11MO.2.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
2
ConsensusRRTGACGTCAb
Best auROC (human)0.7080146668020652
Best auROC (mouse)0.7995623186819019
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words385
TF familyJun-related factors{1.1.1}
TF subfamilyATF-2-like factors{1.1.1.3}
HGNC784
EntrezGene1386
UniProt IDATF2_HUMAN
UniProt ACP15336
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.03483
0.0005 1.00228
0.0001 4.29206
GTEx tissue expression atlas ATF2 expression
ReMap ChIP-seq dataset list ATF2 datasets
Motifs in JASPAR
PCM
ACGT
01123.033.0206.019.0
02194.02.0183.02.0
030.00.00.0381.0
040.00.0381.00.0
05381.00.00.00.0
060.0379.01.01.0
070.00.0381.00.0
080.00.00.0381.0
0972.0309.00.00.0
10380.00.01.00.0
1117.0177.0136.051.0
PWM
ACGT
010.252-1.0310.763-1.552
020.704-3.3230.646-3.323
03-4.176-4.176-4.1761.375
04-4.176-4.1761.375-4.176
051.375-4.176-4.176-4.176
06-4.1761.369-3.661-3.661
07-4.176-4.1761.375-4.176
08-4.176-4.176-4.1761.375
09-0.2751.166-4.176-4.176
101.372-4.176-3.661-4.176
11-1.6550.6130.352-0.611