Model info
Transcription factorAtf3
ModelATF3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusvTGAGTCAb
Best auROC (human)0.9051776183910107
Best auROC (mouse)0.8869371552150229
Peak sets in benchmark (human)36
Peak sets in benchmark (mouse)16
Aligned words500
TF familyFos-related factors{1.1.2}
TF subfamilyATF-3-like factors{1.1.2.2}
MGI109384
EntrezGene11910
UniProt IDATF3_MOUSE
UniProt ACQ60765
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0747
0.0005 6.216595
0.0001 7.67777
GTEx tissue expression atlas Atf3 expression
Motifs in JASPAR
PCM
ACGT
01179.0154.0135.032.0
0220.03.07.0470.0
035.013.0457.025.0
04463.02.09.026.0
0529.00.0471.00.0
0674.016.014.0396.0
0757.0414.025.04.0
08494.04.00.02.0
0918.0178.0135.0169.0
PWM
ACGT
010.3550.2060.076-1.328
02-1.77-3.325-2.6941.315
03-2.961-2.1631.287-1.561
041.3-3.573-2.484-1.525
05-1.421-4.41.317-4.4
06-0.516-1.975-2.0961.145
07-0.7711.189-1.561-3.126
081.365-3.126-4.4-3.573
09-1.8680.350.0760.298