Model info
Transcription factorAtf4
ModelATF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdnMTGATGCAAY
Best auROC (human)0.9976138879040005
Best auROC (mouse)0.9551985620047178
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)9
Aligned words500
TF familyATF-4-related factors{1.1.6}
TF subfamilyATF-4{1.1.6.0.1}
MGI88096
EntrezGene11911
UniProt IDATF4_MOUSE
UniProt ACQ06507
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.45393
0.0005 4.05414
0.0001 6.76093
GTEx tissue expression atlas Atf4 expression
Motifs in JASPAR
PCM
ACGT
01177.036.0207.080.0
02102.0101.0196.0101.0
03278.0147.075.00.0
040.04.00.0496.0
050.04.0492.04.0
06491.04.02.03.0
072.025.01.0472.0
080.00.0500.00.0
0947.0411.00.042.0
10497.02.01.00.0
11499.00.01.00.0
1214.0156.051.0279.0
PWM
ACGT
010.344-1.2150.5-0.439
02-0.201-0.210.445-0.21
030.7930.16-0.503-4.4
04-4.4-3.126-4.41.369
05-4.4-3.1261.361-3.126
061.359-3.126-3.573-3.325
07-3.573-1.561-3.9031.32
08-4.4-4.41.377-4.4
09-0.9581.182-4.4-1.067
101.371-3.573-3.903-4.4
111.375-4.4-3.903-4.4
12-2.0960.219-0.8790.796