Model info
Transcription factorAtoh1
ModelATOH1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
B
Motif rank
0
ConsensusRRCAGMTGK
Best auROC (human)0.7590240511063262
Best auROC (mouse)0.988369181247659
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)4
Aligned words502
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
MGI104654
EntrezGene11921
UniProt IDATOH1_MOUSE
UniProt ACP48985
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.23152
0.0005 5.29101
0.0001 7.86941
GTEx tissue expression atlas Atoh1 expression
ReMap ChIP-seq dataset list Atoh1 datasets
Motifs in JASPAR
PCM
ACGT
01267.021.0189.023.0
02162.077.0261.00.0
031.0498.01.00.0
04499.00.00.01.0
050.04.0487.09.0
06293.0190.017.00.0
079.03.01.0487.0
081.00.0495.04.0
0916.055.0361.068.0
PWM
ACGT
010.752-1.7250.409-1.64
020.256-0.4770.73-4.4
03-3.9031.373-3.903-4.4
041.375-4.4-4.4-3.903
05-4.4-3.1261.351-2.484
060.8450.415-1.92-4.4
07-2.484-3.325-3.9031.351
08-3.903-4.41.367-3.126
09-1.975-0.8051.053-0.599