Model info
Transcription factorBach2
ModelBACH2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdSCYSAGTCAY
Best auROC (human)0.9249653619282661
Best auROC (mouse)0.9872164094665199
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)3
Aligned words500
TF familyJun-related factors{1.1.1}
TF subfamilyNF-E2-like factors{1.1.1.2}
MGI894679
EntrezGene12014
UniProt IDBACH2_MOUSE
UniProt ACP97303
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.39441
0.0005 5.39219
0.0001 7.40826
GTEx tissue expression atlas Bach2 expression
ReMap ChIP-seq dataset list Bach2 datasets
Motifs in JASPAR
PCM
ACGT
0194.069.073.0264.0
0228.050.0394.028.0
0324.0436.021.019.0
0443.047.015.0395.0
0529.049.0380.042.0
06422.017.04.057.0
0713.070.0412.05.0
089.07.01.0483.0
0913.0484.02.01.0
10493.00.02.05.0
117.0184.078.0231.0
PWM
ACGT
01-0.281-0.584-0.5290.741
02-1.454-0.8981.14-1.454
03-1.61.241-1.725-1.818
04-1.044-0.958-2.0341.142
05-1.421-0.9181.104-1.067
061.208-1.92-3.126-0.771
07-2.163-0.571.184-2.961
08-2.484-2.694-3.9031.343
09-2.1631.345-3.573-3.903
101.363-4.4-3.573-2.961
11-2.6940.383-0.4640.608