Model info
Transcription factorBARHL1
ModelBARH1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusTAAWYGbYnhTWA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5695
TF familyNK-related factors{3.1.2}
TF subfamilyBARHL{3.1.2.1}
HGNC953
EntrezGene56751
UniProt IDBARH1_HUMAN
UniProt ACQ9BZE3
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.53051
0.0005 5.64691
0.0001 7.84633
GTEx tissue expression atlas BARHL1 expression
ReMap ChIP-seq dataset list BARHL1 datasets
Motifs in JASPAR
PCM
ACGT
0142.252.253.255634.25
025652.00.03.027.0
035679.00.02.01.0
042749.021.0174.02738.0
05201.02455.0161.02865.0
06370.05.05196.0111.0
07736.02072.01783.01091.0
08352.02030.0350.02950.0
09956.01914.01840.0972.0
101231.51931.5497.52021.5
11705.25337.25124.254515.25
124133.2598.2594.251356.25
134879.0114.0111.0578.0
PWM
ACGT
01-3.467-5.776-5.5721.377
021.38-6.49-5.619-3.887
031.385-6.49-5.834-6.109
040.659-4.118-2.0890.655
05-1.9460.546-2.1660.701
06-1.341-5.2921.296-2.531
07-0.6560.3770.227-0.263
08-1.3910.357-1.3960.73
09-0.3950.2980.258-0.379
10-0.1430.307-1.0460.352
11-0.699-1.433-2.4211.155
121.067-2.651-2.692-0.046
131.233-2.505-2.531-0.897