Model info
Transcription factorBARHL2
ModelBARH2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length18
Quality
D
Motif rank
0
ConsensusvhTAAWYGnYbhhWWWhd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words41168
TF familyNK-related factors{3.1.2}
TF subfamilyBARHL{3.1.2.1}
HGNC954
EntrezGene343472
UniProt IDBARH2_HUMAN
UniProt ACQ9NY43
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.48211
0.0005 5.61891
0.0001 7.96461
GTEx tissue expression atlas BARHL2 expression
ReMap ChIP-seq dataset list BARHL2 datasets
Motifs in JASPAR
PCM
ACGT
019476.2499833.78217728.7725786.443
027154.27116490.1335197.0513983.793
03386.423266.412259.44941912.963
0442328.5227.85263.3405.574
0542751.6633.39127.69412.502
0620391.8877.3841322.65921033.324
07708.89519177.091722.70822216.552
08902.69572.37741600.183249.991
098744.55510605.55914843.1868631.947
102423.36911796.2642673.03125932.583
116191.88216422.31512607.0077604.042
129365.50816247.7015720.57711491.46
1311500.9545238.9284330.08421755.28
1422377.751892.4822133.51917421.495
1521000.289791.372587.95220445.633
1617982.7451379.6722126.95421335.875
1714410.4647798.3895053.83315562.56
189772.3266668.13918648.6887736.093
PWM
ACGT
01-0.122-0.0850.504-0.615
02-0.4030.432-0.7220.267
03-3.315-3.684-3.711.365
041.374-5.861-5.09-3.267
051.384-5.694-5.866-6.56
060.644-4.896-2.0890.675
07-2.7110.583-2.6920.73
08-2.471-4.9611.357-3.747
09-0.202-0.0090.327-0.215
10-1.4850.097-1.3870.885
11-0.5470.4280.163-0.342
12-0.1340.417-0.6270.071
130.072-0.714-0.9050.709
140.737-2.482-1.6120.487
150.674-2.602-2.8980.647
160.518-2.047-1.6150.689
170.297-0.317-0.750.374
18-0.091-0.4730.555-0.325