Model info
| Transcription factor | BHLHE40 (GeneCards) | ||||||||
| Model | BHE40_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dKCACGTGMv | ||||||||
| Best auROC (human) | 0.855 | ||||||||
| Best auROC (mouse) | 0.953 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 508 | ||||||||
| TF family | Hairy-related factors {1.2.4} | ||||||||
| TF subfamily | Hairy-like factors {1.2.4.1} | ||||||||
| HGNC | HGNC:1046 | ||||||||
| EntrezGene | GeneID:8553 (SSTAR profile) | ||||||||
| UniProt ID | BHE40_HUMAN | ||||||||
| UniProt AC | O14503 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BHLHE40 expression | ||||||||
| ReMap ChIP-seq dataset list | BHLHE40 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 173.0 | 42.0 | 185.0 | 100.0 |
| 02 | 85.0 | 7.0 | 314.0 | 94.0 |
| 03 | 49.0 | 449.0 | 1.0 | 1.0 |
| 04 | 472.0 | 6.0 | 8.0 | 14.0 |
| 05 | 4.0 | 465.0 | 8.0 | 23.0 |
| 06 | 26.0 | 21.0 | 450.0 | 3.0 |
| 07 | 23.0 | 7.0 | 23.0 | 447.0 |
| 08 | 1.0 | 0.0 | 499.0 | 0.0 |
| 09 | 292.0 | 117.0 | 58.0 | 33.0 |
| 10 | 46.0 | 229.0 | 190.0 | 35.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.322 | -1.067 | 0.388 | -0.22 |
| 02 | -0.38 | -2.694 | 0.914 | -0.281 |
| 03 | -0.918 | 1.27 | -3.903 | -3.903 |
| 04 | 1.32 | -2.819 | -2.584 | -2.096 |
| 05 | -3.126 | 1.305 | -2.584 | -1.64 |
| 06 | -1.525 | -1.725 | 1.272 | -3.325 |
| 07 | -1.64 | -2.694 | -1.64 | 1.265 |
| 08 | -3.903 | -4.4 | 1.375 | -4.4 |
| 09 | 0.841 | -0.065 | -0.754 | -1.298 |
| 10 | -0.979 | 0.6 | 0.415 | -1.242 |