Model info
Transcription factorArntl
ModelBMAL1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusMCACGTGMb
Best auROC (human)0.865655930373328
Best auROC (mouse)0.8801442566735165
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words501
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
MGI1096381
EntrezGene11865
UniProt IDBMAL1_MOUSE
UniProt ACQ9WTL8
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7917199999999998
0.0005 4.622385
0.0001 6.6025100000000005
GTEx tissue expression atlas Arntl expression
Motifs in JASPAR
PCM
ACGT
01156.0253.090.01.0
0233.0462.01.04.0
03470.09.011.010.0
042.0397.019.082.0
059.06.0480.05.0
065.00.02.0493.0
072.02.0495.01.0
08239.0204.07.050.0
0967.0241.078.0114.0
PWM
ACGT
010.2190.699-0.324-3.903
02-1.2981.298-3.903-3.126
031.315-2.484-2.311-2.394
04-3.5731.147-1.818-0.415
05-2.484-2.8191.336-2.961
06-2.961-4.4-3.5731.363
07-3.573-3.5731.367-3.903
080.6420.485-2.694-0.898
09-0.6130.651-0.464-0.091