Model info
Transcription factorArntl
ModelBMAL1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusMCACGTGMb
Best auROC (human)0.865655930373328
Best auROC (mouse)0.8801442566735165
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words501
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
MGI1096381
EntrezGene11865
UniProt IDBMAL1_MOUSE
UniProt ACQ9WTL8
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.80289
0.0005 4.62424
0.0001 6.6645
GTEx tissue expression atlas Arntl expression
ReMap ChIP-seq dataset list Arntl datasets
Motifs in JASPAR
PCM
ACGT
01156.0253.090.01.0
0233.0462.01.04.0
03470.09.011.010.0
042.0397.019.082.0
059.06.0480.05.0
065.00.02.0493.0
072.02.0495.01.0
08239.0204.07.050.0
0967.0241.078.0114.0
PWM
ACGT
010.2190.699-0.324-3.903
02-1.2981.298-3.903-3.126
031.315-2.484-2.311-2.394
04-3.5731.147-1.818-0.415
05-2.484-2.8191.336-2.961
06-2.961-4.4-3.5731.363
07-3.573-3.5731.367-3.903
080.6420.485-2.694-0.898
09-0.6130.651-0.464-0.091