Model info
Transcription factorCdc5l
ModelCDC5L_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusvbGnKdTAAYRWAWb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words10
TF familyMyb/SANT domain factors{3.5.1}
TF subfamilyMyb-like factors{3.5.1.1}
MGI1918952
EntrezGene71702
UniProt IDCDC5L_MOUSE
UniProt ACQ6A068
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.21212
0.0005 5.84751
0.0001 7.16733
GTEx tissue expression atlas Cdc5l expression
ReMap ChIP-seq dataset list Cdc5l datasets
Motifs in JASPAR
PCM
ACGT
011.51.56.50.5
020.02.04.04.0
032.00.08.00.0
045.01.01.03.0
050.01.03.06.0
062.00.02.06.0
071.00.00.09.0
089.00.01.00.0
098.00.00.02.0
101.06.00.03.0
116.00.03.01.0
122.01.00.07.0
138.01.01.00.0
146.00.01.03.0
150.752.751.754.75
PWM
ACGT
01-0.393-0.3930.833-1.051
02-1.676-0.1770.3970.397
03-0.177-1.6761.025-1.676
040.595-0.669-0.6690.151
05-1.676-0.6690.1510.76
06-0.177-1.676-0.1770.76
07-0.669-1.676-1.6761.136
081.136-1.676-0.669-1.676
091.025-1.676-1.676-0.177
10-0.6690.76-1.6760.151
110.76-1.6760.151-0.669
12-0.177-0.669-1.6760.901
131.025-0.669-0.669-1.676
140.76-1.676-0.6690.151
15-0.8420.078-0.280.549