Model info
Transcription factorCdc5l
ModelCDC5L_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusvbGnKdTAAYRWAWb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words10
TF familyMyb/SANT domain factors{3.5.1}
TF subfamilyMyb-like factors{3.5.1.1}
MGI1918952
EntrezGene71702
UniProt IDCDC5L_MOUSE
UniProt ACQ6A068
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.214169999999999
0.0005 5.84422
0.0001 7.166910000000001
GTEx tissue expression atlas Cdc5l expression
Motifs in JASPAR
PCM
ACGT
011.51.56.50.5
020.02.04.04.0
032.00.08.00.0
045.01.01.03.0
050.01.03.06.0
062.00.02.06.0
071.00.00.09.0
089.00.01.00.0
098.00.00.02.0
101.06.00.03.0
116.00.03.01.0
122.01.00.07.0
138.01.01.00.0
146.00.01.03.0
150.752.751.754.75
PWM
ACGT
01-0.393-0.3930.833-1.051
02-1.676-0.1770.3970.397
03-0.177-1.6761.025-1.676
040.595-0.669-0.6690.151
05-1.676-0.6690.1510.76
06-0.177-1.676-0.1770.76
07-0.669-1.676-1.6761.136
081.136-1.676-0.669-1.676
091.025-1.676-1.676-0.177
10-0.6690.76-1.6760.151
110.76-1.6760.151-0.669
12-0.177-0.669-1.6760.901
131.025-0.669-0.669-1.676
140.76-1.676-0.6690.151
15-0.8420.078-0.280.549