Model info
Transcription factorCDX1
ModelCDX1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
C
Motif rank
0
ConsensushTTKAWGd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words30
TF familyHOX-related factors{3.1.1}
TF subfamilyCDX (Caudal type homeobox){3.1.1.9}
HGNC1805
EntrezGene1044
UniProt IDCDX1_HUMAN
UniProt ACP47902
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.48057
0.0005 5.93803
0.0001 6.80443
PCM
ACGT
0113.9787.3121.4527.258
020.9680.02.90326.129
030.9680.00.96828.065
041.9351.6133.87122.581
0524.1940.04.8390.968
067.4192.7960.96818.817
076.1830.023.8170.0
085.9952.98410.18810.833
PWM
ACGT
010.574-0.023-1.289-0.029
02-1.525-2.284-0.81.173
03-1.525-2.284-1.5251.242
04-1.098-1.221-0.571.032
051.098-2.284-0.384-1.525
06-0.01-0.829-1.5250.857
07-0.172-2.2841.083-2.284
08-0.199-0.7780.2790.336