Model info
Transcription factorCEBPA
ModelCEBPA_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdRTTKhGCAAYv
Best auROC (human)0.9833758916596517
Best auROC (mouse)0.9905025516753264
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)153
Aligned words500
TF familyC/EBP-related{1.1.8}
TF subfamilyC/EBP{1.1.8.1}
HGNC1833
EntrezGene1050
UniProt IDCEBPA_HUMAN
UniProt ACP49715
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.886215
0.0005 6.15834
0.0001 8.22461
GTEx tissue expression atlas CEBPA expression
ReMap ChIP-seq dataset list CEBPA datasets
Motifs in JASPAR
PCM
ACGT
01115.066.0183.0136.0
02173.091.0233.03.0
034.02.03.0491.0
041.01.0140.0358.0
0579.04.0310.0107.0
0688.059.058.0295.0
070.00.0498.02.0
0878.0386.00.036.0
09492.05.01.02.0
10495.00.04.01.0
117.0149.088.0256.0
12160.0166.0111.063.0
PWM
ACGT
01-0.082-0.6280.3770.083
020.322-0.3130.617-3.325
03-3.126-3.573-3.3251.359
04-3.903-3.9030.1121.044
05-0.452-3.1260.901-0.153
06-0.346-0.737-0.7540.852
07-4.4-4.41.373-3.573
08-0.4641.119-4.4-1.215
091.361-2.961-3.903-3.573
101.367-4.4-3.126-3.903
11-2.6940.174-0.3460.711
120.2440.281-0.117-0.673