Model info
Transcription factorCLOCK
ModelCLOCK_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
0
ConsensusdbbbCRYKTGnbhS
Best auROC (human)0.6582184697413299
Best auROC (mouse)0.7345348064028436
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)22
Aligned words253
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
HGNC2082
EntrezGene9575
UniProt IDCLOCK_HUMAN
UniProt ACO15516
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.72481
0.0005 5.32721
0.0001 6.53601
PCM
ACGT
0147.06.075.0124.0
0225.073.098.056.0
0327.071.061.093.0
0427.045.079.0101.0
057.0217.06.022.0
06187.011.030.024.0
0712.0162.014.064.0
0828.032.0153.039.0
0921.011.016.0204.0
103.011.0214.024.0
1144.042.081.085.0
1235.0129.037.051.0
1368.048.029.0107.0
1416.045.0151.040.0
PWM
ACGT
01-0.286-2.1660.1710.667
02-0.8920.1440.434-0.115
03-0.8190.117-0.0320.383
04-0.819-0.3280.2220.464
05-2.0391.221-2.166-1.013
061.074-1.649-0.719-0.931
07-1.5710.931-1.4320.015
08-0.784-0.6570.875-0.466
09-1.057-1.649-1.3091.16
10-2.687-1.6491.208-0.931
11-0.35-0.3950.2470.294
12-0.5710.706-0.517-0.206
130.075-0.265-0.7510.521
14-1.309-0.3280.862-0.442