Model info
Transcription factorEBF1
ModelCOE1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusvdbYCCCMWGGGRvh
Best auROC (human)0.9941768524009118
Best auROC (mouse)0.9921946164836988
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)55
Aligned words500
TF familyEarly B-Cell Factor-related factors{6.1.5}
TF subfamilyEBF1 (COE1){6.1.5.0.1}
HGNC3126
EntrezGene1879
UniProt IDCOE1_HUMAN
UniProt ACQ9UH73
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.04501
0.0005 5.21891
0.0001 7.59651
PCM
ACGT
01209.0101.0100.090.0
02210.045.0136.0109.0
0359.0128.0207.0106.0
0429.0101.012.0358.0
051.0495.01.03.0
067.0407.00.086.0
073.0473.01.023.0
08125.0312.020.043.0
09337.07.06.0150.0
109.00.0491.00.0
11124.01.0362.013.0
123.02.0495.00.0
13329.023.0128.020.0
14110.0217.0127.046.0
15106.0176.046.0172.0
PWM
ACGT
010.509-0.21-0.22-0.324
020.514-1.00.083-0.135
03-0.7370.0230.5-0.163
04-1.421-0.21-2.2341.044
05-3.9031.367-3.903-3.325
06-2.6941.172-4.4-0.368
07-3.3251.322-3.903-1.64
080.00.907-1.77-1.044
090.984-2.694-2.8190.18
10-2.484-4.41.359-4.4
11-0.008-3.9031.055-2.163
12-3.325-3.5731.367-4.4
130.96-1.640.023-1.77
14-0.1260.5460.016-0.979
15-0.1630.339-0.9790.316