Model info
Transcription factorEbf1
ModelCOE1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusdbYCCCWRGGGAv
Best auROC (human)0.9930928389249287
Best auROC (mouse)0.9928080247713514
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)55
Aligned words429
TF familyEarly B-Cell Factor-related factors{6.1.5}
TF subfamilyEBF1 (COE1){6.1.5.0.1}
MGI95275
EntrezGene13591
UniProt IDCOE1_MOUSE
UniProt ACQ07802
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.56146
0.0005 4.7656600000000005
0.0001 7.27792
GTEx tissue expression atlas Ebf1 expression
Motifs in JASPAR
PCM
ACGT
01179.041.0129.080.0
0252.081.0205.091.0
0311.0144.024.0250.0
041.0424.03.01.0
052.0341.02.084.0
062.0419.02.06.0
07173.018.035.0203.0
0881.016.0290.042.0
095.05.0415.04.0
1048.00.0381.00.0
110.00.0429.00.0
12364.08.052.05.0
1385.0186.0129.029.0
PWM
ACGT
010.507-0.9390.182-0.288
02-0.709-0.2760.641-0.162
03-2.1620.291-1.450.838
04-3.7671.364-3.182-3.767
05-3.4321.147-3.432-0.24
06-3.4321.352-3.432-2.672
070.473-1.718-1.0910.631
08-0.276-1.8260.986-0.916
09-2.815-2.8151.343-2.982
10-0.787-4.2741.258-4.274
11-4.274-4.2741.376-4.274
121.212-2.436-0.709-2.815
13-0.2290.5450.182-1.271