Model info
Transcription factorNR2F1
ModelCOT1_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
C
Motif rank
0
ConsensusvdRdbbRRAGGTCAvvv
Best auROC (human)0.8679120159661682
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words489
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
HGNC7975
EntrezGene7025
UniProt IDCOT1_HUMAN
UniProt ACP10589
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.116710000000001
0.0005 10.28486
0.0001 14.69166
GTEx tissue expression atlas NR2F1 expression
ReMap ChIP-seq dataset list NR2F1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0135.05.078.06.056.09.017.017.072.09.090.015.012.01.048.012.0
0232.06.0129.08.011.05.07.01.048.022.0152.011.07.04.032.07.0
0318.013.055.012.010.08.011.08.045.030.0207.038.00.09.014.04.0
0410.015.032.016.013.014.010.023.018.042.094.0133.04.016.028.014.0
0510.010.022.03.030.033.03.021.022.078.036.028.07.0110.047.022.0
0637.010.017.05.0168.021.023.019.055.019.024.010.028.010.029.07.0
07100.011.0172.05.032.00.023.05.035.03.051.04.013.00.028.00.0
08139.00.041.00.012.00.01.01.0173.02.099.00.010.00.04.00.0
095.00.0324.05.00.00.02.00.01.00.0143.01.00.00.01.00.0
100.00.06.00.00.00.00.00.03.02.0461.04.00.00.06.00.0
110.00.02.01.00.00.00.02.00.026.086.0361.00.00.00.04.0
120.00.00.00.01.024.01.00.03.084.01.00.03.0347.011.07.0
137.00.00.00.0438.02.011.04.013.00.00.00.07.00.00.00.0
1478.095.0250.042.00.00.01.01.04.06.00.01.00.01.03.00.0
1531.07.040.04.038.020.028.016.092.066.081.015.07.08.024.05.0
1624.025.096.023.039.028.020.014.032.033.081.027.04.05.023.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.148-1.7340.944-1.5640.614-1.179-0.562-0.5620.864-1.1791.086-0.685-0.902-3.0920.461-0.902
020.06-1.5641.445-1.292-0.986-1.734-1.418-3.0920.461-0.311.608-0.986-1.418-1.940.06-1.418
03-0.506-0.8240.596-0.902-1.078-1.292-0.986-1.2920.397-0.0041.9160.23-4.37-1.179-0.752-1.94
04-1.078-0.6850.06-0.622-0.824-0.752-1.078-0.266-0.5060.3291.1291.475-1.94-0.622-0.072-0.752
05-1.078-1.078-0.31-2.198-0.0040.09-2.198-0.355-0.310.9440.176-0.072-1.4181.2860.44-0.31
060.203-1.078-0.562-1.7341.708-0.355-0.266-0.4540.596-0.454-0.224-1.078-0.072-1.078-0.038-1.418
071.191-0.9861.732-1.7340.06-4.37-0.266-1.7340.148-2.1980.521-1.94-0.824-4.37-0.072-4.37
081.519-4.370.305-4.37-0.902-4.37-3.092-3.0921.737-2.5481.181-4.37-1.078-4.37-1.94-4.37
09-1.734-4.372.364-1.734-4.37-4.37-2.548-4.37-3.092-4.371.547-3.092-4.37-4.37-3.092-4.37
10-4.37-4.37-1.564-4.37-4.37-4.37-4.37-4.37-2.198-2.5482.716-1.94-4.37-4.37-1.564-4.37
11-4.37-4.37-2.548-3.092-4.37-4.37-4.37-2.548-4.37-0.1451.0412.472-4.37-4.37-4.37-1.94
12-4.37-4.37-4.37-4.37-3.092-0.224-3.092-4.37-2.1981.017-3.092-4.37-2.1982.432-0.986-1.418
13-1.418-4.37-4.37-4.372.665-2.548-0.986-1.94-0.824-4.37-4.37-4.37-1.418-4.37-4.37-4.37
140.9441.142.1050.329-4.37-4.37-3.092-3.092-1.94-1.564-4.37-3.092-4.37-3.092-2.198-4.37
150.028-1.4180.28-1.940.23-0.403-0.072-0.6221.1080.7770.981-0.685-1.418-1.292-0.224-1.734
16-0.224-0.1841.15-0.2660.255-0.072-0.403-0.7520.060.090.981-0.108-1.94-1.734-0.266-1.292