Model info
Transcription factorNR2F1
ModelCOT1_HUMAN.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
1
ConsensusbvdRAGGKCAvvR
Best auROC (human)0.8511567179058595
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words478
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
HGNC7975
EntrezGene7025
UniProt IDCOT1_HUMAN
UniProt ACP10589
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.67831
0.0005 5.66471
0.0001 7.59164
GTEx tissue expression atlas NR2F1 expression
ReMap ChIP-seq dataset list NR2F1 datasets
Motifs in JASPAR
PCM
ACGT
0140.093.0183.0162.0
0260.0240.0136.042.0
03283.052.080.063.0
04176.016.0283.03.0
05344.00.0133.01.0
064.01.0455.018.0
073.00.0462.013.0
084.033.0104.0337.0
0916.0437.013.012.0
10474.01.03.00.0
11107.074.0251.046.0
12150.070.0218.040.0
1370.046.0304.058.0
PWM
ACGT
01-1.069-0.2470.4220.301
02-0.6760.6910.128-1.022
030.855-0.816-0.395-0.629
040.383-1.9320.855-3.283
051.049-4.3630.106-3.863
06-3.084-3.8631.328-1.824
07-3.283-4.3631.343-2.119
08-3.084-1.254-0.1371.029
09-1.9321.287-2.119-2.19
101.368-3.863-3.283-4.363
11-0.109-0.4710.735-0.935
120.225-0.5260.595-1.069
13-0.526-0.9350.926-0.709