Model info
Transcription factorNr2f1
ModelCOT1_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
C
Motif rank
1
ConsensusSdbYWRAGKTCA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words84
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
MGI1352451
EntrezGene13865
UniProt IDCOT1_MOUSE
UniProt ACQ60632
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.224819999999999
0.0005 6.012219999999999
0.0001 7.59428
GTEx tissue expression atlas Nr2f1 expression
Motifs in JASPAR
PCM
ACGT
016.9859.62558.4486.943
027.6136.18840.16128.037
039.13618.81720.22833.82
048.38157.3875.11311.12
0562.2346.2023.7729.792
0649.9694.27420.9686.789
0759.4540.021.7080.838
081.4250.080.5750.0
091.5923.68853.4623.26
103.1856.442.34770.029
110.75471.0765.494.68
1266.8788.2073.7093.206
PWM
ACGT
01-0.983-0.71.014-0.988
02-0.908-1.0860.6470.299
03-0.747-0.081-0.0130.48
04-0.8230.996-1.246-0.57
051.076-1.084-1.489-0.685
060.86-1.3910.021-1.007
071.031-2.9760.054-2.41
08-2.146-2.9761.33-2.976
09-2.082-1.5060.9270.12
10-1.617-1.052-1.8351.192
11-2.4541.206-1.187-1.318
121.146-0.842-1.502-1.612