Model info
Transcription factorNR2F2
ModelCOT2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnddbnvMRAGGTCAvvdn
Best auROC (human)0.9479773401580834
Best auROC (mouse)0.8344795503160817
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words505
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
HGNC7976
EntrezGene7026
UniProt IDCOT2_HUMAN
UniProt ACP24468
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.431910000000002
0.0005 11.46846
0.0001 15.522960000000001
GTEx tissue expression atlas NR2F2 expression
ReMap ChIP-seq dataset list NR2F2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0143.014.090.022.039.014.07.032.054.012.048.025.023.07.050.020.0
0230.016.095.018.026.06.03.012.047.026.098.024.021.012.044.022.0
0318.030.056.020.014.026.09.011.038.026.0134.042.08.019.027.022.0
0415.014.027.022.032.044.09.016.021.060.088.057.015.046.020.014.0
0526.038.012.07.049.090.03.022.019.081.026.018.08.068.020.013.0
0657.016.022.07.0222.029.04.022.043.04.08.06.031.05.018.06.0
07159.031.0151.012.041.010.03.00.023.02.026.01.011.07.021.02.0
08185.00.044.05.045.02.01.02.0146.01.051.03.011.00.04.00.0
093.00.0377.07.01.00.02.00.00.00.0100.00.01.00.09.00.0
100.00.05.00.00.00.00.00.02.01.0450.035.00.00.07.00.0
110.00.00.02.00.00.00.01.01.026.033.0402.01.03.02.029.0
120.02.00.00.01.028.00.00.00.033.00.02.01.0410.05.018.0
132.00.00.00.0467.01.00.05.05.00.00.00.020.00.00.00.0
14143.090.0204.057.01.00.00.00.00.00.00.00.00.01.04.00.0
1536.08.084.016.044.013.012.022.083.044.065.016.05.013.031.08.0
1630.014.0104.020.038.011.014.015.037.015.0107.033.09.09.028.016.0
1739.018.046.011.013.014.03.019.062.059.078.054.016.015.021.032.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.316-0.7881.05-0.3460.219-0.788-1.4540.0230.542-0.9380.425-0.22-0.302-1.4540.465-0.439
02-0.04-0.6581.104-0.543-0.181-1.6-2.234-0.9380.404-0.1811.135-0.26-0.392-0.9380.339-0.346
03-0.543-0.040.578-0.439-0.788-0.181-1.215-1.0220.193-0.1811.4460.293-1.328-0.49-0.144-0.346
04-0.721-0.788-0.144-0.3460.0230.339-1.215-0.658-0.3920.6461.0270.595-0.7210.383-0.439-0.788
05-0.1810.193-0.938-1.4540.4451.05-2.234-0.346-0.490.945-0.181-0.543-1.3280.771-0.439-0.86
060.595-0.658-0.346-1.4541.95-0.074-1.975-0.3460.316-1.975-1.328-1.6-0.008-1.77-0.543-1.6
071.617-0.0081.565-0.9380.269-1.114-2.234-4.4-0.302-2.584-0.181-3.126-1.022-1.454-0.392-2.584
081.768-4.40.339-1.770.361-2.584-3.126-2.5841.532-3.1260.485-2.234-1.022-4.4-1.975-4.4
09-2.234-4.42.479-1.454-3.126-4.4-2.584-4.4-4.4-4.41.155-4.4-3.126-4.4-1.215-4.4
10-4.4-4.4-1.77-4.4-4.4-4.4-4.4-4.4-2.584-3.1262.6560.112-4.4-4.4-1.454-4.4
11-4.4-4.4-4.4-2.584-4.4-4.4-4.4-3.126-3.126-0.1810.0542.543-3.126-2.234-2.584-0.074
12-4.4-2.584-4.4-4.4-3.126-0.108-4.4-4.4-4.40.054-4.4-2.584-3.1262.563-1.77-0.543
13-2.584-4.4-4.4-4.42.693-3.126-4.4-1.77-1.77-4.4-4.4-4.4-0.439-4.4-4.4-4.4
141.5111.051.8660.595-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-1.975-4.4
150.14-1.3280.981-0.6580.339-0.86-0.938-0.3460.9690.3390.726-0.658-1.77-0.86-0.008-1.328
16-0.04-0.7881.194-0.4390.193-1.022-0.788-0.7210.167-0.7211.2220.054-1.215-1.215-0.108-0.658
170.219-0.5430.383-1.022-0.86-0.788-2.234-0.490.6790.630.9070.542-0.658-0.721-0.3920.023