Model info
Transcription factorNR2F2
ModelCOT2_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
1
ConsensusdRdvbhWRAGGKCAvvv
Best auROC (human)0.9152081836788205
Best auROC (mouse)0.731996716668941
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words503
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
HGNC7976
EntrezGene7026
UniProt IDCOT2_HUMAN
UniProt ACP24468
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.00161
0.0005 5.87041
0.0001 7.62601
GTEx tissue expression atlas NR2F2 expression
ReMap ChIP-seq dataset list NR2F2 datasets
Motifs in JASPAR
PCM
ACGT
01158.043.0215.084.0
02132.023.0282.063.0
03135.051.0254.060.0
0491.092.0256.061.0
0564.0132.0100.0204.0
0699.0272.062.067.0
07319.038.059.084.0
08249.012.0229.010.0
09366.01.0129.04.0
1013.02.0450.035.0
1114.05.0455.026.0
126.024.092.0378.0
1335.0416.024.025.0
14479.07.08.06.0
15113.090.0208.089.0
16151.098.0187.064.0
17130.077.0232.061.0
PWM
ACGT
010.232-1.0440.537-0.392
020.054-1.640.807-0.673
030.076-0.8790.703-0.721
04-0.313-0.3020.711-0.705
05-0.6580.054-0.220.485
06-0.230.771-0.689-0.613
070.929-1.163-0.737-0.392
080.683-2.2340.6-2.394
091.066-3.9030.031-3.126
10-2.163-3.5731.272-1.242
11-2.096-2.9611.283-1.525
12-2.819-1.6-0.3021.098
13-1.2421.194-1.6-1.561
141.334-2.694-2.584-2.819
15-0.1-0.3240.504-0.335
160.187-0.240.399-0.658
170.039-0.4770.613-0.705