Model info
Transcription factorNr2f2
ModelCOT2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnhhRAGGTCAvvd
Best auROC (human)0.9314546559416983
Best auROC (mouse)0.8463510905533245
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words500
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
MGI1352452
EntrezGene11819
UniProt IDCOT2_MOUSE
UniProt ACP43135
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.30091
0.0005 6.16736
0.0001 7.951630000000001
GTEx tissue expression atlas Nr2f2 expression
Motifs in JASPAR
PCM
ACGT
0186.0174.0126.0114.0
02136.0212.072.080.0
03274.095.055.076.0
04240.041.0188.031.0
05382.02.0111.05.0
0617.00.0478.05.0
078.03.0477.012.0
089.031.044.0416.0
092.0454.020.024.0
10486.01.05.08.0
11164.078.0188.070.0
12207.073.0176.044.0
13142.054.0203.0101.0
PWM
ACGT
01-0.3680.3270.008-0.091
020.0830.523-0.543-0.439
030.778-0.271-0.805-0.49
040.646-1.090.404-1.358
051.109-3.573-0.117-2.961
06-1.92-4.41.332-2.961
07-2.584-3.3251.33-2.234
08-2.484-1.358-1.0221.194
09-3.5731.281-1.77-1.6
101.349-3.903-2.961-2.584
110.269-0.4640.404-0.57
120.5-0.5290.339-1.022
130.126-0.8230.48-0.21