Model info
Transcription factorNr2f2
ModelCOT2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnhhRAGGTCAvvd
Best auROC (human)0.9314546559416983
Best auROC (mouse)0.8463510905533245
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words500
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
MGI1352452
EntrezGene11819
UniProt IDCOT2_MOUSE
UniProt ACP43135
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.29601
0.0005 6.17021
0.0001 7.95291
GTEx tissue expression atlas Nr2f2 expression
ReMap ChIP-seq dataset list Nr2f2 datasets
Motifs in JASPAR
PCM
ACGT
0186.0174.0126.0114.0
02136.0212.072.080.0
03274.095.055.076.0
04240.041.0188.031.0
05382.02.0111.05.0
0617.00.0478.05.0
078.03.0477.012.0
089.031.044.0416.0
092.0454.020.024.0
10486.01.05.08.0
11164.078.0188.070.0
12207.073.0176.044.0
13142.054.0203.0101.0
PWM
ACGT
01-0.3680.3270.008-0.091
020.0830.523-0.543-0.439
030.778-0.271-0.805-0.49
040.646-1.090.404-1.358
051.109-3.573-0.117-2.961
06-1.92-4.41.332-2.961
07-2.584-3.3251.33-2.234
08-2.484-1.358-1.0221.194
09-3.5731.281-1.77-1.6
101.349-3.903-2.961-2.584
110.269-0.4640.404-0.57
120.5-0.5290.339-1.022
130.126-0.8230.48-0.21