Model info
Transcription factorCreb1
ModelCREB1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusndRTGACGYhW
Best auROC (human)0.9267877376024539
Best auROC (mouse)0.8882756098039869
Peak sets in benchmark (human)63
Peak sets in benchmark (mouse)8
Aligned words501
TF familyCREB-related factors{1.1.7}
TF subfamilyCREB-like factors{1.1.7.1}
MGI88494
EntrezGene12912
UniProt IDCREB1_MOUSE
UniProt ACQ01147
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.21267
0.0005 5.0203050000000005
0.0001 6.4990000000000006
GTEx tissue expression atlas Creb1 expression
Motifs in JASPAR
PCM
ACGT
01141.0143.076.0140.0
02173.048.0213.066.0
03255.021.0218.06.0
042.012.05.0481.0
054.03.0489.04.0
06485.00.011.04.0
075.0433.014.048.0
089.06.0448.037.0
0940.0134.06.0320.0
10157.0252.041.050.0
11311.061.058.070.0
PWM
ACGT
010.1190.133-0.490.112
020.322-0.9380.528-0.628
030.707-1.7250.551-2.819
04-3.573-2.234-2.9611.338
05-3.126-3.3251.355-3.126
061.347-4.4-2.311-3.126
07-2.9611.234-2.096-0.938
08-2.484-2.8191.268-1.189
09-1.1140.069-2.8190.932
100.2250.695-1.09-0.898
110.904-0.705-0.754-0.57