Model info
Transcription factorCrx
ModelCRX_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensushvRdvGGATTAdv
Best auROC (human)
Best auROC (mouse)0.93346949847898
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)8
Aligned words500
TF familyPaired-related HD factors{3.1.3}
TF subfamilyOTX{3.1.3.17}
MGI1194883
EntrezGene12951
UniProt IDCRX_MOUSE
UniProt ACO54751
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.28031
0.0005 6.12481
0.0001 7.81792
GTEx tissue expression atlas Crx expression
Motifs in JASPAR
PCM
ACGT
01124.082.076.0218.0
02267.052.0131.050.0
03287.023.0138.052.0
0486.046.0283.085.0
05249.082.0131.038.0
0696.03.0388.013.0
0716.05.0468.011.0
08382.0109.08.01.0
090.00.00.0500.0
1011.029.012.0448.0
11440.02.017.041.0
12135.033.0263.069.0
13117.0162.0172.049.0
PWM
ACGT
01-0.008-0.415-0.490.551
020.752-0.860.046-0.898
030.824-1.640.098-0.86
04-0.368-0.9790.81-0.38
050.683-0.4150.046-1.163
06-0.26-3.3251.124-2.163
07-1.975-2.9611.311-2.311
081.109-0.135-2.584-3.903
09-4.4-4.4-4.41.377
10-2.311-1.421-2.2341.268
111.25-3.573-1.92-1.09
120.076-1.2980.737-0.584
13-0.0650.2560.316-0.918