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Model info
Transcription factorCTCF
(GeneCards)
ModelCTCF_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
A
Motif rank
0
ConsensusnbbRCCRShAGGKGGCRSbvbnv
Best auROC (human)0.999
Best auROC (mouse)0.999
Peak sets in benchmark (human)502
Peak sets in benchmark (mouse)263
Aligned words502
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyCTCF-like factors {2.3.3.50}
HGNCHGNC:13723
EntrezGeneGeneID:10664
(SSTAR profile)
UniProt IDCTCF_HUMAN
UniProt ACP49711
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.019989999999999997
0.0005 2.59441
0.0001 8.19436
GTEx tissue expression atlas CTCF expression
ReMap ChIP-seq dataset list CTCF datasets
Motifs in JASPAR
MA0139.1 (CTCF; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.027.015.045.017.045.014.071.018.073.011.061.03.046.016.037.0
027.03.026.03.044.035.055.057.013.010.027.06.09.029.0158.018.0
0318.03.045.07.028.01.031.017.047.021.0168.030.010.05.061.08.0
046.091.04.02.03.026.00.01.026.0246.09.024.02.058.01.01.0
051.036.00.00.05.0412.03.01.00.014.00.00.00.028.00.00.0
060.00.06.00.0366.06.081.037.00.01.02.00.00.00.01.00.0
073.0207.0152.04.01.05.01.00.02.052.034.02.00.018.019.00.0
080.03.01.02.052.0115.019.096.013.0153.016.024.01.00.02.03.0
0936.017.011.02.0266.00.04.01.029.03.03.03.0112.01.010.02.0
102.02.0438.01.02.00.019.00.01.01.025.01.00.00.08.00.0
111.00.04.00.00.00.03.00.0169.01.0316.04.00.00.02.00.0
120.04.0123.043.00.00.00.01.018.013.0139.0155.01.00.02.01.0
131.00.018.00.00.00.016.01.00.01.0262.01.01.00.0199.00.0
140.00.02.00.00.00.00.01.025.011.0436.023.00.00.02.00.0
150.021.00.04.00.09.01.01.031.0377.06.026.00.023.00.01.0
167.00.024.00.0199.06.0222.03.01.00.06.00.03.00.029.00.0
174.047.0156.03.03.00.00.03.021.0213.034.013.00.03.00.00.0
182.015.02.09.033.093.018.0119.010.0101.022.057.02.07.010.00.0
1914.014.015.04.0136.043.027.010.010.028.011.03.027.034.0122.02.0
2019.028.0100.040.025.020.041.033.013.063.028.071.01.03.011.04.0
2119.013.016.010.036.024.028.026.071.050.024.035.014.035.060.039.0
2213.016.0106.05.034.024.046.018.021.035.057.015.03.022.073.012.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-3.126-0.144-0.7210.361-0.5990.361-0.7880.814-0.5430.841-1.0220.663-2.2340.383-0.6580.167
02-1.454-2.234-0.181-2.2340.3390.1120.560.595-0.86-1.114-0.144-1.6-1.215-0.0741.611-0.543
03-0.543-2.2340.361-1.454-0.108-3.126-0.008-0.5990.404-0.3921.672-0.04-1.114-1.770.663-1.328
04-1.61.061-1.975-2.584-2.234-0.181-4.4-3.126-0.1812.053-1.215-0.26-2.5840.613-3.126-3.126
05-3.1260.14-4.4-4.4-1.772.568-2.234-3.126-4.4-0.788-4.4-4.4-4.4-0.108-4.4-4.4
06-4.4-4.4-1.6-4.42.449-1.60.9450.167-4.4-3.126-2.584-4.4-4.4-4.4-3.126-4.4
07-2.2341.881.572-1.975-3.126-1.77-3.126-4.4-2.5840.5040.083-2.584-4.4-0.543-0.49-4.4
08-4.4-2.234-3.126-2.5840.5041.294-0.491.114-0.861.579-0.658-0.26-3.126-4.4-2.584-2.234
090.14-0.599-1.022-2.5842.131-4.4-1.975-3.126-0.074-2.234-2.234-2.2341.268-3.126-1.114-2.584
10-2.584-2.5842.629-3.126-2.584-4.4-0.49-4.4-3.126-3.126-0.22-3.126-4.4-4.4-1.328-4.4
11-3.126-4.4-1.975-4.4-4.4-4.4-2.234-4.41.678-3.1262.303-1.975-4.4-4.4-2.584-4.4
12-4.4-1.9751.3610.316-4.4-4.4-4.4-3.126-0.543-0.861.4831.592-3.126-4.4-2.584-3.126
13-3.126-4.4-0.543-4.4-4.4-4.4-0.658-3.126-4.4-3.1262.115-3.126-3.126-4.41.841-4.4
14-4.4-4.4-2.584-4.4-4.4-4.4-4.4-3.126-0.22-1.0222.624-0.302-4.4-4.4-2.584-4.4
15-4.4-0.392-4.4-1.975-4.4-1.215-3.126-3.126-0.0082.479-1.6-0.181-4.4-0.302-4.4-3.126
16-1.454-4.4-0.26-4.41.841-1.61.95-2.234-3.126-4.4-1.6-4.4-2.234-4.4-0.074-4.4
17-1.9750.4041.598-2.234-2.234-4.4-4.4-2.234-0.3921.9090.083-0.86-4.4-2.234-4.4-4.4
18-2.584-0.721-2.584-1.2150.0541.082-0.5431.328-1.1141.165-0.3460.595-2.584-1.454-1.114-4.4
19-0.788-0.788-0.721-1.9751.4610.316-0.144-1.114-1.114-0.108-1.022-2.234-0.1440.0831.353-2.584
20-0.49-0.1081.1550.244-0.22-0.4390.2690.054-0.860.695-0.1080.814-3.126-2.234-1.022-1.975
21-0.49-0.86-0.658-1.1140.14-0.26-0.108-0.1810.8140.465-0.260.112-0.7880.1120.6460.219
22-0.86-0.6581.213-1.770.083-0.260.383-0.543-0.3920.1120.595-0.721-2.234-0.3460.841-0.938