Model info
Transcription factorCtcf
ModelCTCF_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusbbdCCRSYAGGKGGCGSbvb
Best auROC (human)0.9976869872392883
Best auROC (mouse)0.9991576265599755
Peak sets in benchmark (human)502
Peak sets in benchmark (mouse)263
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyCTCF-like factors{2.3.3.50}
MGI109447
EntrezGene13018
UniProt IDCTCF_MOUSE
UniProt ACQ61164
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.07389
0.0005 1.29481
0.0001 4.14541
GTEx tissue expression atlas Ctcf expression
ReMap ChIP-seq dataset list Ctcf datasets
Motifs in JASPAR
PCM
ACGT
0140.0184.064.0212.0
0274.088.0263.075.0
03102.046.0294.058.0
0420.0438.024.018.0
054.0495.00.01.0
06318.09.0143.030.0
0710.0301.0184.05.0
0852.0306.021.0121.0
09443.019.026.012.0
101.00.0497.02.0
11174.00.0325.01.0
1217.018.0320.0145.0
131.04.0490.05.0
1411.010.0450.029.0
1533.0452.00.015.0
16126.03.0369.02.0
1732.0335.0123.010.0
1845.0181.059.0215.0
19146.0152.0179.023.0
2046.0121.0180.0153.0
PWM
ACGT
01-1.1140.383-0.6580.523
02-0.516-0.3460.737-0.503
03-0.201-0.9790.848-0.754
04-1.771.245-1.6-1.868
05-3.1261.367-4.4-3.903
060.926-2.4840.133-1.389
07-2.3940.8720.383-2.961
08-0.860.888-1.725-0.032
091.256-1.818-1.525-2.234
10-3.903-4.41.371-3.573
110.327-4.40.948-3.903
12-1.92-1.8680.9320.147
13-3.903-3.1261.357-2.961
14-2.311-2.3941.272-1.421
15-1.2981.276-4.4-2.034
160.008-3.3251.074-3.573
17-1.3280.978-0.016-2.394
18-1.00.366-0.7370.537
190.1540.1930.355-1.64
20-0.979-0.0320.3610.2