Model info
Transcription factorCux1
ModelCUX1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
C
Motif rank
0
ConsensusvbRvndATYRRTbb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words97
TF familyHD-CUT factors{3.1.9}
TF subfamilyCUX{3.1.9.2}
MGI88568
EntrezGene13047
UniProt IDCUX1_MOUSE
UniProt ACP53564
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.76941
0.0005 5.47911
0.0001 6.82241
GTEx tissue expression atlas Cux1 expression
Motifs in JASPAR
PCM
ACGT
0145.54813.73331.1286.638
0212.13119.56936.50728.839
0330.32713.50450.0113.204
0419.25523.60443.97410.214
0515.24927.72331.04223.031
0626.3227.09534.10429.526
0791.8961.033.091.03
081.032.2890.093.728
090.065.5184.1227.409
1013.0464.1273.76.18
1166.8340.026.0934.12
121.1442.1740.093.728
136.86625.17749.2115.793
1412.41717.79637.82329.011
PWM
ACGT
010.609-0.5350.239-1.183
02-0.649-0.2040.3930.166
030.214-0.5510.7-1.765
04-0.219-0.0260.574-0.805
05-0.4380.1280.237-0.05
060.078-1.1260.3270.188
071.298-2.458-1.792-2.458
08-2.458-2.002-3.1011.318
09-3.1010.965-1.5740.117
10-0.582-1.5741.08-1.244
110.984-3.1010.07-1.574
12-2.407-2.036-3.1011.318
13-1.1540.0350.684-0.405
14-0.628-0.2940.4280.171