Model info
Transcription factorCux2
ModelCUX2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensushRRTCAATvvv
Best auROC (human)
Best auROC (mouse)0.8673219194323042
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)5
Aligned words496
TF familyHD-CUT factors{3.1.9}
TF subfamilyCUX{3.1.9.2}
MGI107321
EntrezGene13048
UniProt IDCUX2_MOUSE
UniProt ACP70298
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.68912
0.0005 6.38346
0.0001 7.78355
GTEx tissue expression atlas Cux2 expression
ReMap ChIP-seq dataset list Cux2 datasets
Motifs in JASPAR
PCM
ACGT
01229.093.050.0117.0
02280.017.0162.030.0
03351.041.076.021.0
0438.025.023.0403.0
055.0458.022.04.0
06407.032.039.011.0
07387.083.011.08.0
0836.03.047.0403.0
09173.089.0198.029.0
10259.082.098.050.0
11216.0103.093.077.0
PWM
ACGT
010.622-0.27-0.876-0.043
020.822-1.8980.278-1.367
031.047-1.068-0.468-1.703
04-1.141-1.54-1.6181.184
05-2.9391.312-1.66-3.105
061.194-1.306-1.116-2.289
071.144-0.381-2.289-2.562
08-1.193-3.304-0.9361.184
090.344-0.3130.477-1.399
100.744-0.393-0.218-0.876
110.564-0.169-0.27-0.455