Model info
Transcription factorCux2
ModelCUX2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensushRRTCAATvvv
Best auROC (human)
Best auROC (mouse)0.8673219194323042
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)5
Aligned words496
TF familyHD-CUT factors{3.1.9}
TF subfamilyCUX{3.1.9.2}
MGI107321
EntrezGene13048
UniProt IDCUX2_MOUSE
UniProt ACP70298
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.69159
0.0005 6.3776
0.0001 7.782705
GTEx tissue expression atlas Cux2 expression
Motifs in JASPAR
PCM
ACGT
01229.093.050.0117.0
02280.017.0162.030.0
03351.041.076.021.0
0438.025.023.0403.0
055.0458.022.04.0
06407.032.039.011.0
07387.083.011.08.0
0836.03.047.0403.0
09173.089.0198.029.0
10259.082.098.050.0
11216.0103.093.077.0
PWM
ACGT
010.622-0.27-0.876-0.043
020.822-1.8980.278-1.367
031.047-1.068-0.468-1.703
04-1.141-1.54-1.6181.184
05-2.9391.312-1.66-3.105
061.194-1.306-1.116-2.289
071.144-0.381-2.289-2.562
08-1.193-3.304-0.9361.184
090.344-0.3130.477-1.399
100.744-0.393-0.218-0.876
110.564-0.169-0.27-0.455