Model info
Transcription factorDmrt1
ModelDMRT1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
C
Motif rank
0
ConsensushdGhhACAAWGTWdChv
Best auROC (human)0.551961828185557
Best auROC (mouse)0.9865777172939683
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)4
Aligned words500
TF familyDMRT{2.5.1}
TF subfamilyDMRT1{2.5.1.0.1}
MGI1354733
EntrezGene50796
UniProt IDDMRT1_MOUSE
UniProt ACQ9QZ59
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.02331
0.0005 5.15401
0.0001 7.50181
GTEx tissue expression atlas Dmrt1 expression
ReMap ChIP-seq dataset list Dmrt1 datasets
Motifs in JASPAR
PCM
ACGT
01102.0116.059.0223.0
02156.021.0136.0187.0
0331.023.0432.014.0
04194.0168.023.0115.0
05180.051.037.0232.0
06479.07.05.09.0
0720.0467.05.08.0
08439.03.01.057.0
09381.0119.00.00.0
10162.03.08.0327.0
115.010.0484.01.0
1215.02.04.0479.0
13250.021.056.0173.0
14130.013.0200.0157.0
156.0458.013.023.0
16233.0119.017.0131.0
17239.087.097.077.0
PWM
ACGT
01-0.201-0.074-0.7370.573
020.219-1.7250.0830.399
03-1.358-1.641.231-2.096
040.4350.293-1.64-0.082
050.361-0.879-1.1890.613
061.334-2.694-2.961-2.484
07-1.771.309-2.961-2.584
081.247-3.325-3.903-0.771
091.106-0.049-4.4-4.4
100.256-3.325-2.5840.954
11-2.961-2.3941.345-3.903
12-2.034-3.573-3.1261.334
130.687-1.725-0.7880.322
140.039-2.1630.4650.225
15-2.8191.29-2.163-1.64
160.617-0.049-1.920.046
170.642-0.357-0.25-0.477