Model info
Transcription factorDmrtb1
ModelDMRTB_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusbdGhWACWTTGTddCh
Best auROC (human)
Best auROC (mouse)0.89943525974613
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words500
TF familyDMRT{2.5.1}
TF subfamilyDMRTB1{2.5.1.0.6}
MGI1927125
EntrezGene56296
UniProt IDDMRTB_MOUSE
UniProt ACA2A9I7
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.76241
0.0005 5.68891
0.0001 7.58791
GTEx tissue expression atlas Dmrtb1 expression
ReMap ChIP-seq dataset list Dmrtb1 datasets
Motifs in JASPAR
PCM
ACGT
0160.0121.0119.0200.0
0299.048.0148.0205.0
0318.012.0433.037.0
04150.0217.021.0112.0
05133.061.014.0292.0
06430.032.016.022.0
075.0475.013.07.0
08331.021.013.0135.0
090.02.0130.0368.0
1064.011.018.0407.0
1119.025.0424.032.0
1223.021.013.0443.0
13245.040.063.0152.0
14100.027.0169.0204.0
1533.0416.021.030.0
16162.0168.033.0137.0
PWM
ACGT
01-0.721-0.032-0.0490.465
02-0.23-0.9380.1670.49
03-1.868-2.2341.234-1.189
040.180.546-1.725-0.108
050.061-0.705-2.0960.841
061.227-1.328-1.975-1.681
07-2.9611.326-2.163-2.694
080.966-1.725-2.1630.076
09-4.4-3.5730.0391.072
10-0.658-2.311-1.8681.172
11-1.818-1.5611.213-1.328
12-1.64-1.725-2.1631.256
130.667-1.114-0.6730.193
14-0.22-1.4890.2980.485
15-1.2981.194-1.725-1.389
160.2560.293-1.2980.091