Model info
Transcription factorDmrtb1
ModelDMRTB_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusbdGhWACWTTGTddCh
Best auROC (human)
Best auROC (mouse)0.89943525974613
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words500
TF familyDMRT{2.5.1}
TF subfamilyDMRTB1{2.5.1.0.6}
MGI1927125
EntrezGene56296
UniProt IDDMRTB_MOUSE
UniProt ACA2A9I7
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.76786
0.0005 5.68556
0.0001 7.587810000000001
GTEx tissue expression atlas Dmrtb1 expression
Motifs in JASPAR
PCM
ACGT
0160.0121.0119.0200.0
0299.048.0148.0205.0
0318.012.0433.037.0
04150.0217.021.0112.0
05133.061.014.0292.0
06430.032.016.022.0
075.0475.013.07.0
08331.021.013.0135.0
090.02.0130.0368.0
1064.011.018.0407.0
1119.025.0424.032.0
1223.021.013.0443.0
13245.040.063.0152.0
14100.027.0169.0204.0
1533.0416.021.030.0
16162.0168.033.0137.0
PWM
ACGT
01-0.721-0.032-0.0490.465
02-0.23-0.9380.1670.49
03-1.868-2.2341.234-1.189
040.180.546-1.725-0.108
050.061-0.705-2.0960.841
061.227-1.328-1.975-1.681
07-2.9611.326-2.163-2.694
080.966-1.725-2.1630.076
09-4.4-3.5730.0391.072
10-0.658-2.311-1.8681.172
11-1.818-1.5611.213-1.328
12-1.64-1.725-2.1631.256
130.667-1.114-0.6730.193
14-0.22-1.4890.2980.485
15-1.2981.194-1.725-1.389
160.2560.293-1.2980.091