Model info
Transcription factorDUXA
ModelDUXA_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusTGATTARvTYR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2685
TF familyPaired-related HD factors{3.1.3}
TF subfamilyDUX{3.1.3.7}
HGNC32179
EntrezGene503835
UniProt IDDUXA_HUMAN
UniProt ACA6NLW8
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.83709
0.0005 5.0328
0.0001 7.86705
GTEx tissue expression atlas DUXA expression
ReMap ChIP-seq dataset list DUXA datasets
Motifs in JASPAR
PCM
ACGT
0167.7553.7548.752514.75
0252.05.02620.08.0
032668.56.57.52.5
044.250.252.252678.25
053.013.015.02654.0
062315.014.0355.01.0
071435.0268.0962.020.0
081408.5280.5834.5161.5
0935.254.2543.252602.25
10166.0803.0154.01562.0
111771.5197.5365.5350.5
PWM
ACGT
01-2.268-2.492-2.5861.319
02-2.524-4.571.36-4.212
031.378-4.375-4.264-5.014
04-4.684-5.713-5.0711.382
05-4.908-3.806-3.681.372
061.236-3.741-0.634-5.422
070.758-0.9140.359-3.422
080.74-0.8680.217-1.415
09-2.895-4.684-2.71.353
10-1.3880.179-1.4620.843
110.969-1.216-0.605-0.647