Model info
Transcription factorE2f1
ModelE2F1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvdRGGCGGGRvv
Best auROC (human)0.8917429208524569
Best auROC (mouse)0.9740759833149844
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)21
Aligned words500
TF familyE2F-related factors{3.3.2}
TF subfamilyE2F{3.3.2.1}
MGI101941
EntrezGene13555
UniProt IDE2F1_MOUSE
UniProt ACQ61501
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.19491
0.0005 4.12496
0.0001 5.94437
GTEx tissue expression atlas E2f1 expression
Motifs in JASPAR
PCM
ACGT
0189.081.0254.076.0
02186.057.0168.089.0
0385.012.0322.081.0
0429.052.0413.06.0
057.04.0487.02.0
068.0462.02.028.0
0712.04.0467.017.0
0839.09.0442.010.0
0911.08.0481.00.0
10287.021.0185.07.0
11253.0141.082.024.0
12178.0101.0151.070.0
PWM
ACGT
01-0.335-0.4270.703-0.49
020.393-0.7710.293-0.335
03-0.38-2.2340.939-0.427
04-1.421-0.861.187-2.819
05-2.694-3.1261.351-3.573
06-2.5841.298-3.573-1.454
07-2.234-3.1261.309-1.92
08-1.138-2.4841.254-2.394
09-2.311-2.5841.338-4.4
100.824-1.7250.388-2.694
110.6990.119-0.415-1.6
120.35-0.210.187-0.57