Model info
Transcription factorE2f1
ModelE2F1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvdRGGCGGGRvv
Best auROC (human)0.8917429208524569
Best auROC (mouse)0.9740759833149844
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)21
Aligned words500
TF familyE2F-related factors{3.3.2}
TF subfamilyE2F{3.3.2.1}
MGI101941
EntrezGene13555
UniProt IDE2F1_MOUSE
UniProt ACQ61501
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.19041
0.0005 4.12961
0.0001 5.94703
GTEx tissue expression atlas E2f1 expression
ReMap ChIP-seq dataset list E2f1 datasets
Motifs in JASPAR
PCM
ACGT
0189.081.0254.076.0
02186.057.0168.089.0
0385.012.0322.081.0
0429.052.0413.06.0
057.04.0487.02.0
068.0462.02.028.0
0712.04.0467.017.0
0839.09.0442.010.0
0911.08.0481.00.0
10287.021.0185.07.0
11253.0141.082.024.0
12178.0101.0151.070.0
PWM
ACGT
01-0.335-0.4270.703-0.49
020.393-0.7710.293-0.335
03-0.38-2.2340.939-0.427
04-1.421-0.861.187-2.819
05-2.694-3.1261.351-3.573
06-2.5841.298-3.573-1.454
07-2.234-3.1261.309-1.92
08-1.138-2.4841.254-2.394
09-2.311-2.5841.338-4.4
100.824-1.7250.388-2.694
110.6990.119-0.415-1.6
120.35-0.210.187-0.57