Model info
| Transcription factor | E2F2 (GeneCards) | ||||||||
| Model | E2F2_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 10 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RGCGCGMAWC | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 8 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| HGNC | HGNC:3114 | ||||||||
| EntrezGene | GeneID:1870 (SSTAR profile) | ||||||||
| UniProt ID | E2F2_HUMAN | ||||||||
| UniProt AC | Q14209 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2F2 expression | ||||||||
| ReMap ChIP-seq dataset list | E2F2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.242 | 1.121 | 5.485 | 0.152 |
| 02 | 0.0 | 0.0 | 8.0 | 0.0 |
| 03 | 0.0 | 6.303 | 1.697 | 0.0 |
| 04 | 0.0 | 0.0 | 8.0 | 0.0 |
| 05 | 0.0 | 6.303 | 1.091 | 0.606 |
| 06 | 0.0 | 0.303 | 7.697 | 0.0 |
| 07 | 5.333 | 1.576 | 1.091 | 0.0 |
| 08 | 7.03 | 0.97 | 0.0 | 0.0 |
| 09 | 5.333 | 0.0 | 0.606 | 2.061 |
| 10 | 0.333 | 5.909 | 0.333 | 1.424 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.358 | -0.429 | 0.868 | -1.323 |
| 02 | -1.578 | -1.578 | 1.218 | -1.578 |
| 03 | -1.578 | 0.996 | -0.128 | -1.578 |
| 04 | -1.578 | -1.578 | 1.218 | -1.578 |
| 05 | -1.578 | 0.996 | -0.447 | -0.806 |
| 06 | -1.578 | -1.119 | 1.182 | -1.578 |
| 07 | 0.843 | -0.184 | -0.447 | -1.578 |
| 08 | 1.097 | -0.526 | -1.578 | -1.578 |
| 09 | 0.843 | -1.578 | -0.806 | 0.024 |
| 10 | -1.083 | 0.937 | -1.083 | -0.259 |